Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Dkk1O54908 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Dkk1O54908 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Dkk1O54908 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Dkk1O54908 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Dkk1O54908 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Dkk1O54908 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Dkk1O54908 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Dkk1O54908 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.76■□□□□ 0.43
Dkk1O54908 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Dkk1O54908 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Dkk1O54908 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.76■□□□□ 0.43
Dkk1O54908 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Dkk1O54908 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Dkk1O54908 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Dkk1O54908 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Dkk1O54908 Gm44645-201ENSMUST00000205492 1653 ntBASIC17.75■□□□□ 0.43
Dkk1O54908 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Dkk1O54908 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.75■□□□□ 0.43
Dkk1O54908 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Dkk1O54908 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Dkk1O54908 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.75■□□□□ 0.43
Dkk1O54908 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Dkk1O54908 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Dkk1O54908 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Dkk1O54908 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Dkk1O54908 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Dkk1O54908 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Dkk1O54908 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Dkk1O54908 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Dkk1O54908 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Dkk1O54908 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Dkk1O54908 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.74■□□□□ 0.43
Dkk1O54908 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Dkk1O54908 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Dkk1O54908 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Dkk1O54908 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Dkk1O54908 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Dkk1O54908 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Dkk1O54908 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Dkk1O54908 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Dkk1O54908 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Dkk1O54908 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Dkk1O54908 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.73■□□□□ 0.43
Dkk1O54908 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC17.73■□□□□ 0.43
Dkk1O54908 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Dkk1O54908 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.73■□□□□ 0.43
Dkk1O54908 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Dkk1O54908 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Dkk1O54908 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.73■□□□□ 0.43
Dkk1O54908 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Dkk1O54908 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Dkk1O54908 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Dkk1O54908 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Dkk1O54908 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Dkk1O54908 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Dkk1O54908 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Dkk1O54908 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Dkk1O54908 Gm22238-201ENSMUST00000175222 88 ntBASIC17.72■□□□□ 0.43
Dkk1O54908 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Dkk1O54908 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.72■□□□□ 0.43
Dkk1O54908 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.72■□□□□ 0.43
Dkk1O54908 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.72■□□□□ 0.43
Dkk1O54908 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Dkk1O54908 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Dkk1O54908 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Dkk1O54908 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Dkk1O54908 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.71■□□□□ 0.43
Dkk1O54908 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.71■□□□□ 0.43
Dkk1O54908 CT009764.1-201ENSMUST00000222260 483 ntBASIC17.71■□□□□ 0.43
Dkk1O54908 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Dkk1O54908 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Dkk1O54908 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Dkk1O54908 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
Dkk1O54908 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.7■□□□□ 0.42
Dkk1O54908 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Dkk1O54908 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Dkk1O54908 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.69■□□□□ 0.42
Dkk1O54908 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Dkk1O54908 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.69■□□□□ 0.42
Dkk1O54908 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Dkk1O54908 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Dkk1O54908 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Dkk1O54908 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Dkk1O54908 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Dkk1O54908 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Dkk1O54908 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.68■□□□□ 0.42
Dkk1O54908 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Dkk1O54908 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Dkk1O54908 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Dkk1O54908 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Dkk1O54908 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
Dkk1O54908 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Dkk1O54908 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.67■□□□□ 0.42
Dkk1O54908 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Dkk1O54908 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Dkk1O54908 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Dkk1O54908 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Dkk1O54908 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Dkk1O54908 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms