Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv17A0A140T8P8 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.69■□□□□ 0.1
Trbv17A0A140T8P8 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv17A0A140T8P8 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv17A0A140T8P8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv17A0A140T8P8 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trbv17A0A140T8P8 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Trbv17A0A140T8P8 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC15.68■□□□□ 0.1
Trbv17A0A140T8P8 Gm15546-201ENSMUST00000122095 826 ntBASIC15.68■□□□□ 0.1
Trbv17A0A140T8P8 Gm5812-201ENSMUST00000061073 957 ntBASIC15.68■□□□□ 0.1
Trbv17A0A140T8P8 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv17A0A140T8P8 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv17A0A140T8P8 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.67■□□□□ 0.1
Trbv17A0A140T8P8 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trbv17A0A140T8P8 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC15.67■□□□□ 0.1
Trbv17A0A140T8P8 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trbv17A0A140T8P8 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trbv17A0A140T8P8 Gm5522-201ENSMUST00000189483 1242 ntBASIC15.67■□□□□ 0.1
Trbv17A0A140T8P8 Gm18755-201ENSMUST00000218030 1099 ntBASIC15.67■□□□□ 0.1
Trbv17A0A140T8P8 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trbv17A0A140T8P8 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv17A0A140T8P8 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv17A0A140T8P8 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv17A0A140T8P8 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv17A0A140T8P8 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv17A0A140T8P8 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv17A0A140T8P8 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv17A0A140T8P8 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv17A0A140T8P8 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv17A0A140T8P8 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv17A0A140T8P8 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv17A0A140T8P8 AC116713.1-201ENSMUST00000215074 430 ntBASIC15.66■□□□□ 0.1
Trbv17A0A140T8P8 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv17A0A140T8P8 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv17A0A140T8P8 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv17A0A140T8P8 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv17A0A140T8P8 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv17A0A140T8P8 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv17A0A140T8P8 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Trbv17A0A140T8P8 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Trbv17A0A140T8P8 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv17A0A140T8P8 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC15.65■□□□□ 0.1
Trbv17A0A140T8P8 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Trbv17A0A140T8P8 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv17A0A140T8P8 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trbv17A0A140T8P8 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv17A0A140T8P8 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC15.65■□□□□ 0.1
Trbv17A0A140T8P8 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Trbv17A0A140T8P8 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv17A0A140T8P8 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC15.64■□□□□ 0.09
Trbv17A0A140T8P8 Gm42501-201ENSMUST00000200220 1026 ntBASIC15.64■□□□□ 0.09
Trbv17A0A140T8P8 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC15.64■□□□□ 0.09
Trbv17A0A140T8P8 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv17A0A140T8P8 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv17A0A140T8P8 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC15.64■□□□□ 0.09
Trbv17A0A140T8P8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trbv17A0A140T8P8 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC15.64■□□□□ 0.09
Trbv17A0A140T8P8 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trbv17A0A140T8P8 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv17A0A140T8P8 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv17A0A140T8P8 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC15.63■□□□□ 0.09
Trbv17A0A140T8P8 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv17A0A140T8P8 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC15.63■□□□□ 0.09
Trbv17A0A140T8P8 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv17A0A140T8P8 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv17A0A140T8P8 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv17A0A140T8P8 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv17A0A140T8P8 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv17A0A140T8P8 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv17A0A140T8P8 AC164883.3-201ENSMUST00000227396 1774 ntBASIC15.62■□□□□ 0.09
Trbv17A0A140T8P8 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv17A0A140T8P8 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv17A0A140T8P8 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC15.62■□□□□ 0.09
Trbv17A0A140T8P8 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv17A0A140T8P8 Gm10620-201ENSMUST00000098379 1332 ntBASIC15.62■□□□□ 0.09
Trbv17A0A140T8P8 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv17A0A140T8P8 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv17A0A140T8P8 Gm12504-201ENSMUST00000120860 2231 ntBASIC15.62■□□□□ 0.09
Trbv17A0A140T8P8 Gm38160-201ENSMUST00000193090 2499 ntBASIC15.61■□□□□ 0.09
Trbv17A0A140T8P8 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv17A0A140T8P8 Gm10399-202ENSMUST00000202768 748 ntBASIC15.61■□□□□ 0.09
Trbv17A0A140T8P8 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv17A0A140T8P8 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.61■□□□□ 0.09
Trbv17A0A140T8P8 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv17A0A140T8P8 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv17A0A140T8P8 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv17A0A140T8P8 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trbv17A0A140T8P8 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv17A0A140T8P8 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv17A0A140T8P8 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv17A0A140T8P8 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv17A0A140T8P8 Gm43403-201ENSMUST00000198011 1786 ntBASIC15.6■□□□□ 0.09
Trbv17A0A140T8P8 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv17A0A140T8P8 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv17A0A140T8P8 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trbv17A0A140T8P8 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv17A0A140T8P8 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC15.6■□□□□ 0.09
Trbv17A0A140T8P8 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv17A0A140T8P8 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv17A0A140T8P8 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms