Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.04■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.04■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.03■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm45444-201ENSMUST00000211394 898 ntBASIC18.02■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.02■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.01■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.01■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.01■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Cap2-205ENSMUST00000225824 1634 ntBASIC18.01■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.99■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.99■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.97■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms