Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv5A0A0B4J1G9 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv5A0A0B4J1G9 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv5A0A0B4J1G9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv5A0A0B4J1G9 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Trbv5A0A0B4J1G9 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trbv5A0A0B4J1G9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv5A0A0B4J1G9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv5A0A0B4J1G9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Trbv5A0A0B4J1G9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv5A0A0B4J1G9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv5A0A0B4J1G9 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.48■□□□□ 0.23
Trbv5A0A0B4J1G9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv5A0A0B4J1G9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.48■□□□□ 0.23
Trbv5A0A0B4J1G9 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trbv5A0A0B4J1G9 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv5A0A0B4J1G9 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv5A0A0B4J1G9 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv5A0A0B4J1G9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.48■□□□□ 0.23
Trbv5A0A0B4J1G9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.48■□□□□ 0.23
Trbv5A0A0B4J1G9 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv5A0A0B4J1G9 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv5A0A0B4J1G9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trbv5A0A0B4J1G9 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv5A0A0B4J1G9 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv5A0A0B4J1G9 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv5A0A0B4J1G9 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv5A0A0B4J1G9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv5A0A0B4J1G9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv5A0A0B4J1G9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv5A0A0B4J1G9 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv5A0A0B4J1G9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv5A0A0B4J1G9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv5A0A0B4J1G9 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv5A0A0B4J1G9 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv5A0A0B4J1G9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trbv5A0A0B4J1G9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv5A0A0B4J1G9 Gm8503-201ENSMUST00000118131 455 ntBASIC16.46■□□□□ 0.23
Trbv5A0A0B4J1G9 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Trbv5A0A0B4J1G9 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv5A0A0B4J1G9 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC16.46■□□□□ 0.23
Trbv5A0A0B4J1G9 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv5A0A0B4J1G9 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv5A0A0B4J1G9 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv5A0A0B4J1G9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.46■□□□□ 0.23
Trbv5A0A0B4J1G9 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv5A0A0B4J1G9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.46■□□□□ 0.23
Trbv5A0A0B4J1G9 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv5A0A0B4J1G9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
Trbv5A0A0B4J1G9 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.46■□□□□ 0.22
Trbv5A0A0B4J1G9 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv5A0A0B4J1G9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv5A0A0B4J1G9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv5A0A0B4J1G9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv5A0A0B4J1G9 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv5A0A0B4J1G9 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Trbv5A0A0B4J1G9 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.45■□□□□ 0.22
Trbv5A0A0B4J1G9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Trbv5A0A0B4J1G9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv5A0A0B4J1G9 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv5A0A0B4J1G9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv5A0A0B4J1G9 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.44■□□□□ 0.22
Trbv5A0A0B4J1G9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv5A0A0B4J1G9 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv5A0A0B4J1G9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv5A0A0B4J1G9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv5A0A0B4J1G9 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Trbv5A0A0B4J1G9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv5A0A0B4J1G9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv5A0A0B4J1G9 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv5A0A0B4J1G9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv5A0A0B4J1G9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv5A0A0B4J1G9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv5A0A0B4J1G9 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC16.43■□□□□ 0.22
Trbv5A0A0B4J1G9 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv5A0A0B4J1G9 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv5A0A0B4J1G9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv5A0A0B4J1G9 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC16.43■□□□□ 0.22
Trbv5A0A0B4J1G9 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv5A0A0B4J1G9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trbv5A0A0B4J1G9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trbv5A0A0B4J1G9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv5A0A0B4J1G9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv5A0A0B4J1G9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv5A0A0B4J1G9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trbv5A0A0B4J1G9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv5A0A0B4J1G9 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv5A0A0B4J1G9 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC16.42■□□□□ 0.22
Trbv5A0A0B4J1G9 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.42■□□□□ 0.22
Trbv5A0A0B4J1G9 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv5A0A0B4J1G9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trbv5A0A0B4J1G9 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv5A0A0B4J1G9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv5A0A0B4J1G9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.42■□□□□ 0.22
Trbv5A0A0B4J1G9 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv5A0A0B4J1G9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv5A0A0B4J1G9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trbv5A0A0B4J1G9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Trbv5A0A0B4J1G9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv5A0A0B4J1G9 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms