Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Trav7n-4A0A075B620 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav7n-4A0A075B620 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav7n-4A0A075B620 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav7n-4A0A075B620 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav7n-4A0A075B620 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav7n-4A0A075B620 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav7n-4A0A075B620 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav7n-4A0A075B620 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav7n-4A0A075B620 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav7n-4A0A075B620 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav7n-4A0A075B620 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav7n-4A0A075B620 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trav7n-4A0A075B620 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav7n-4A0A075B620 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav7n-4A0A075B620 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav7n-4A0A075B620 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav7n-4A0A075B620 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trav7n-4A0A075B620 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav7n-4A0A075B620 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav7n-4A0A075B620 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav7n-4A0A075B620 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav7n-4A0A075B620 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav7n-4A0A075B620 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav7n-4A0A075B620 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trav7n-4A0A075B620 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC15.53■□□□□ 0.08
Trav7n-4A0A075B620 AC154454.1-201ENSMUST00000225253 216 ntBASIC15.53■□□□□ 0.08
Trav7n-4A0A075B620 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trav7n-4A0A075B620 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav7n-4A0A075B620 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC15.53■□□□□ 0.08
Trav7n-4A0A075B620 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trav7n-4A0A075B620 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav7n-4A0A075B620 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav7n-4A0A075B620 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav7n-4A0A075B620 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav7n-4A0A075B620 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav7n-4A0A075B620 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Trav7n-4A0A075B620 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trav7n-4A0A075B620 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trav7n-4A0A075B620 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav7n-4A0A075B620 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav7n-4A0A075B620 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
Trav7n-4A0A075B620 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trav7n-4A0A075B620 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav7n-4A0A075B620 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav7n-4A0A075B620 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trav7n-4A0A075B620 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Trav7n-4A0A075B620 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav7n-4A0A075B620 Gm45364-201ENSMUST00000210883 159 ntBASIC15.51■□□□□ 0.07
Trav7n-4A0A075B620 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav7n-4A0A075B620 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav7n-4A0A075B620 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
Trav7n-4A0A075B620 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav7n-4A0A075B620 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav7n-4A0A075B620 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav7n-4A0A075B620 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav7n-4A0A075B620 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trav7n-4A0A075B620 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav7n-4A0A075B620 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav7n-4A0A075B620 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.51■□□□□ 0.07
Trav7n-4A0A075B620 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav7n-4A0A075B620 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav7n-4A0A075B620 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav7n-4A0A075B620 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav7n-4A0A075B620 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav7n-4A0A075B620 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav7n-4A0A075B620 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trav7n-4A0A075B620 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav7n-4A0A075B620 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav7n-4A0A075B620 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav7n-4A0A075B620 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav7n-4A0A075B620 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav7n-4A0A075B620 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
Trav7n-4A0A075B620 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.49■□□□□ 0.07
Trav7n-4A0A075B620 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav7n-4A0A075B620 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav7n-4A0A075B620 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.49■□□□□ 0.07
Trav7n-4A0A075B620 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav7n-4A0A075B620 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav7n-4A0A075B620 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC15.49■□□□□ 0.07
Trav7n-4A0A075B620 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Trav7n-4A0A075B620 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav7n-4A0A075B620 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav7n-4A0A075B620 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav7n-4A0A075B620 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav7n-4A0A075B620 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav7n-4A0A075B620 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trav7n-4A0A075B620 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav7n-4A0A075B620 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav7n-4A0A075B620 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Trav7n-4A0A075B620 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC15.48■□□□□ 0.07
Trav7n-4A0A075B620 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav7n-4A0A075B620 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7n-4A0A075B620 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7n-4A0A075B620 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7n-4A0A075B620 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7n-4A0A075B620 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trav7n-4A0A075B620 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7n-4A0A075B620 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7n-4A0A075B620 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms