Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn9Q9Z0S7 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Cldn9Q9Z0S7 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn9Q9Z0S7 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn9Q9Z0S7 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn9Q9Z0S7 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn9Q9Z0S7 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn9Q9Z0S7 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Cldn9Q9Z0S7 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn9Q9Z0S7 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Cldn9Q9Z0S7 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cldn9Q9Z0S7 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cldn9Q9Z0S7 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cldn9Q9Z0S7 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cldn9Q9Z0S7 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cldn9Q9Z0S7 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cldn9Q9Z0S7 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cldn9Q9Z0S7 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cldn9Q9Z0S7 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cldn9Q9Z0S7 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cldn9Q9Z0S7 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cldn9Q9Z0S7 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cldn9Q9Z0S7 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Cldn9Q9Z0S7 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.88■□□□□ 0.77
Cldn9Q9Z0S7 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cldn9Q9Z0S7 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
Cldn9Q9Z0S7 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.87■□□□□ 0.77
Cldn9Q9Z0S7 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn9Q9Z0S7 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn9Q9Z0S7 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.87■□□□□ 0.77
Cldn9Q9Z0S7 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.87■□□□□ 0.77
Cldn9Q9Z0S7 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn9Q9Z0S7 Gm10232-201ENSMUST00000089221 720 ntBASIC19.87■□□□□ 0.77
Cldn9Q9Z0S7 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.87■□□□□ 0.77
Cldn9Q9Z0S7 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn9Q9Z0S7 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn9Q9Z0S7 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn9Q9Z0S7 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Cldn9Q9Z0S7 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn9Q9Z0S7 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.86■□□□□ 0.77
Cldn9Q9Z0S7 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn9Q9Z0S7 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn9Q9Z0S7 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.86■□□□□ 0.77
Cldn9Q9Z0S7 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Cldn9Q9Z0S7 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn9Q9Z0S7 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn9Q9Z0S7 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn9Q9Z0S7 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.86■□□□□ 0.77
Cldn9Q9Z0S7 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cldn9Q9Z0S7 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Cldn9Q9Z0S7 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cldn9Q9Z0S7 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cldn9Q9Z0S7 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Cldn9Q9Z0S7 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cldn9Q9Z0S7 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cldn9Q9Z0S7 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cldn9Q9Z0S7 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cldn9Q9Z0S7 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cldn9Q9Z0S7 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cldn9Q9Z0S7 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cldn9Q9Z0S7 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.84■□□□□ 0.77
Cldn9Q9Z0S7 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Cldn9Q9Z0S7 Gm10399-202ENSMUST00000202768 748 ntBASIC19.84■□□□□ 0.77
Cldn9Q9Z0S7 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.84■□□□□ 0.77
Cldn9Q9Z0S7 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cldn9Q9Z0S7 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cldn9Q9Z0S7 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cldn9Q9Z0S7 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cldn9Q9Z0S7 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cldn9Q9Z0S7 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Cldn9Q9Z0S7 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cldn9Q9Z0S7 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cldn9Q9Z0S7 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cldn9Q9Z0S7 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Cldn9Q9Z0S7 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Cldn9Q9Z0S7 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cldn9Q9Z0S7 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cldn9Q9Z0S7 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cldn9Q9Z0S7 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cldn9Q9Z0S7 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cldn9Q9Z0S7 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cldn9Q9Z0S7 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Cldn9Q9Z0S7 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.81■□□□□ 0.76
Cldn9Q9Z0S7 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cldn9Q9Z0S7 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cldn9Q9Z0S7 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cldn9Q9Z0S7 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Cldn9Q9Z0S7 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cldn9Q9Z0S7 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.8■□□□□ 0.76
Cldn9Q9Z0S7 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
Cldn9Q9Z0S7 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cldn9Q9Z0S7 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cldn9Q9Z0S7 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cldn9Q9Z0S7 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Cldn9Q9Z0S7 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.8■□□□□ 0.76
Cldn9Q9Z0S7 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.8■□□□□ 0.76
Cldn9Q9Z0S7 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.8■□□□□ 0.76
Cldn9Q9Z0S7 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cldn9Q9Z0S7 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Cldn9Q9Z0S7 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms