Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atp6ap1Q9R1Q9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atp6ap1Q9R1Q9 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Atp6ap1Q9R1Q9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atp6ap1Q9R1Q9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atp6ap1Q9R1Q9 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atp6ap1Q9R1Q9 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atp6ap1Q9R1Q9 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atp6ap1Q9R1Q9 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atp6ap1Q9R1Q9 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atp6ap1Q9R1Q9 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Atp6ap1Q9R1Q9 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.23■□□□□ 0.83
Atp6ap1Q9R1Q9 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.23■□□□□ 0.83
Atp6ap1Q9R1Q9 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.23■□□□□ 0.83
Atp6ap1Q9R1Q9 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atp6ap1Q9R1Q9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atp6ap1Q9R1Q9 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atp6ap1Q9R1Q9 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atp6ap1Q9R1Q9 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.22■□□□□ 0.83
Atp6ap1Q9R1Q9 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atp6ap1Q9R1Q9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atp6ap1Q9R1Q9 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.22■□□□□ 0.83
Atp6ap1Q9R1Q9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atp6ap1Q9R1Q9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Atp6ap1Q9R1Q9 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.22■□□□□ 0.83
Atp6ap1Q9R1Q9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atp6ap1Q9R1Q9 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Atp6ap1Q9R1Q9 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.22■□□□□ 0.83
Atp6ap1Q9R1Q9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atp6ap1Q9R1Q9 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atp6ap1Q9R1Q9 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Atp6ap1Q9R1Q9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Atp6ap1Q9R1Q9 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.21■□□□□ 0.83
Atp6ap1Q9R1Q9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atp6ap1Q9R1Q9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atp6ap1Q9R1Q9 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atp6ap1Q9R1Q9 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atp6ap1Q9R1Q9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atp6ap1Q9R1Q9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.21■□□□□ 0.83
Atp6ap1Q9R1Q9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atp6ap1Q9R1Q9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atp6ap1Q9R1Q9 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atp6ap1Q9R1Q9 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.2■□□□□ 0.82
Atp6ap1Q9R1Q9 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.2■□□□□ 0.82
Atp6ap1Q9R1Q9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atp6ap1Q9R1Q9 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Atp6ap1Q9R1Q9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Atp6ap1Q9R1Q9 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atp6ap1Q9R1Q9 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atp6ap1Q9R1Q9 Etf1-202ENSMUST00000180351 108 ntBASIC20.19■□□□□ 0.82
Atp6ap1Q9R1Q9 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atp6ap1Q9R1Q9 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atp6ap1Q9R1Q9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atp6ap1Q9R1Q9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atp6ap1Q9R1Q9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atp6ap1Q9R1Q9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.19■□□□□ 0.82
Atp6ap1Q9R1Q9 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.18■□□□□ 0.82
Atp6ap1Q9R1Q9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Atp6ap1Q9R1Q9 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Atp6ap1Q9R1Q9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atp6ap1Q9R1Q9 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Atp6ap1Q9R1Q9 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atp6ap1Q9R1Q9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atp6ap1Q9R1Q9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Atp6ap1Q9R1Q9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Atp6ap1Q9R1Q9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atp6ap1Q9R1Q9 Gm7417-201ENSMUST00000192950 473 ntBASIC20.17■□□□□ 0.82
Atp6ap1Q9R1Q9 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.17■□□□□ 0.82
Atp6ap1Q9R1Q9 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atp6ap1Q9R1Q9 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atp6ap1Q9R1Q9 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.17■□□□□ 0.82
Atp6ap1Q9R1Q9 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.17■□□□□ 0.82
Atp6ap1Q9R1Q9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Atp6ap1Q9R1Q9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.16■□□□□ 0.82
Atp6ap1Q9R1Q9 Gm9959-201ENSMUST00000068277 390 ntBASIC20.16■□□□□ 0.82
Atp6ap1Q9R1Q9 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atp6ap1Q9R1Q9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atp6ap1Q9R1Q9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.15■□□□□ 0.82
Atp6ap1Q9R1Q9 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Atp6ap1Q9R1Q9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.15■□□□□ 0.82
Atp6ap1Q9R1Q9 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Atp6ap1Q9R1Q9 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Atp6ap1Q9R1Q9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Atp6ap1Q9R1Q9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.15■□□□□ 0.82
Atp6ap1Q9R1Q9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Atp6ap1Q9R1Q9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.82
Atp6ap1Q9R1Q9 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Atp6ap1Q9R1Q9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
Atp6ap1Q9R1Q9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atp6ap1Q9R1Q9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atp6ap1Q9R1Q9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atp6ap1Q9R1Q9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Atp6ap1Q9R1Q9 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Atp6ap1Q9R1Q9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.14■□□□□ 0.81
Atp6ap1Q9R1Q9 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atp6ap1Q9R1Q9 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Atp6ap1Q9R1Q9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.13■□□□□ 0.81
Atp6ap1Q9R1Q9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Atp6ap1Q9R1Q9 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Atp6ap1Q9R1Q9 Rps24-207ENSMUST00000224568 714 ntBASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 114.2 ms