Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ube4bQ9ES00 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ube4bQ9ES00 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.7■□□□□ 0.74
Ube4bQ9ES00 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ube4bQ9ES00 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.7■□□□□ 0.74
Ube4bQ9ES00 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.69■□□□□ 0.74
Ube4bQ9ES00 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ube4bQ9ES00 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Ube4bQ9ES00 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ube4bQ9ES00 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ube4bQ9ES00 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ube4bQ9ES00 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ube4bQ9ES00 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ube4bQ9ES00 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ube4bQ9ES00 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ube4bQ9ES00 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Ube4bQ9ES00 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ube4bQ9ES00 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.68■□□□□ 0.74
Ube4bQ9ES00 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ube4bQ9ES00 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ube4bQ9ES00 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ube4bQ9ES00 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.68■□□□□ 0.74
Ube4bQ9ES00 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ube4bQ9ES00 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ube4bQ9ES00 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Ube4bQ9ES00 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.68■□□□□ 0.74
Ube4bQ9ES00 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ube4bQ9ES00 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ube4bQ9ES00 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ube4bQ9ES00 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
Ube4bQ9ES00 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ube4bQ9ES00 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ube4bQ9ES00 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ube4bQ9ES00 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ube4bQ9ES00 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ube4bQ9ES00 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ube4bQ9ES00 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ube4bQ9ES00 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ube4bQ9ES00 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.67■□□□□ 0.74
Ube4bQ9ES00 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Ube4bQ9ES00 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.66■□□□□ 0.74
Ube4bQ9ES00 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.66■□□□□ 0.74
Ube4bQ9ES00 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ube4bQ9ES00 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Ube4bQ9ES00 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.66■□□□□ 0.74
Ube4bQ9ES00 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
Ube4bQ9ES00 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Ube4bQ9ES00 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ube4bQ9ES00 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ube4bQ9ES00 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ube4bQ9ES00 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ube4bQ9ES00 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Ube4bQ9ES00 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ube4bQ9ES00 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ube4bQ9ES00 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ube4bQ9ES00 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ube4bQ9ES00 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ube4bQ9ES00 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ube4bQ9ES00 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ube4bQ9ES00 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ube4bQ9ES00 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ube4bQ9ES00 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Ube4bQ9ES00 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ube4bQ9ES00 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ube4bQ9ES00 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ube4bQ9ES00 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Ube4bQ9ES00 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.63■□□□□ 0.73
Ube4bQ9ES00 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.63■□□□□ 0.73
Ube4bQ9ES00 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Ube4bQ9ES00 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Ube4bQ9ES00 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ube4bQ9ES00 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ube4bQ9ES00 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.63■□□□□ 0.73
Ube4bQ9ES00 Terc-201ENSMUST00000082862 423 ntBASIC19.63■□□□□ 0.73
Ube4bQ9ES00 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ube4bQ9ES00 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ube4bQ9ES00 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.62■□□□□ 0.73
Ube4bQ9ES00 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ube4bQ9ES00 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.62■□□□□ 0.73
Ube4bQ9ES00 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ube4bQ9ES00 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ube4bQ9ES00 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Ube4bQ9ES00 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ube4bQ9ES00 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Ube4bQ9ES00 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.61■□□□□ 0.73
Ube4bQ9ES00 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.61■□□□□ 0.73
Ube4bQ9ES00 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ube4bQ9ES00 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ube4bQ9ES00 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ube4bQ9ES00 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Ube4bQ9ES00 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ube4bQ9ES00 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ube4bQ9ES00 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ube4bQ9ES00 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Ube4bQ9ES00 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ube4bQ9ES00 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ube4bQ9ES00 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ube4bQ9ES00 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ube4bQ9ES00 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ube4bQ9ES00 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms