Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Hmg20aQ9DC33 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.78■□□□□ 0.6
Hmg20aQ9DC33 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.78■□□□□ 0.6
Hmg20aQ9DC33 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Hmg20aQ9DC33 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.78■□□□□ 0.6
Hmg20aQ9DC33 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.78■□□□□ 0.6
Hmg20aQ9DC33 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmg20aQ9DC33 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmg20aQ9DC33 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmg20aQ9DC33 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Hmg20aQ9DC33 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.77■□□□□ 0.6
Hmg20aQ9DC33 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hmg20aQ9DC33 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hmg20aQ9DC33 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hmg20aQ9DC33 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hmg20aQ9DC33 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hmg20aQ9DC33 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.77■□□□□ 0.6
Hmg20aQ9DC33 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.6
Hmg20aQ9DC33 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.77■□□□□ 0.6
Hmg20aQ9DC33 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Hmg20aQ9DC33 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hmg20aQ9DC33 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmg20aQ9DC33 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmg20aQ9DC33 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmg20aQ9DC33 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Hmg20aQ9DC33 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.76■□□□□ 0.59
Hmg20aQ9DC33 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.76■□□□□ 0.59
Hmg20aQ9DC33 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmg20aQ9DC33 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Hmg20aQ9DC33 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmg20aQ9DC33 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Hmg20aQ9DC33 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmg20aQ9DC33 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hmg20aQ9DC33 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hmg20aQ9DC33 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Hmg20aQ9DC33 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hmg20aQ9DC33 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hmg20aQ9DC33 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hmg20aQ9DC33 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hmg20aQ9DC33 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Hmg20aQ9DC33 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Hmg20aQ9DC33 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hmg20aQ9DC33 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hmg20aQ9DC33 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmg20aQ9DC33 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Hmg20aQ9DC33 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmg20aQ9DC33 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmg20aQ9DC33 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmg20aQ9DC33 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmg20aQ9DC33 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Hmg20aQ9DC33 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmg20aQ9DC33 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmg20aQ9DC33 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hmg20aQ9DC33 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hmg20aQ9DC33 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmg20aQ9DC33 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmg20aQ9DC33 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Hmg20aQ9DC33 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hmg20aQ9DC33 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmg20aQ9DC33 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmg20aQ9DC33 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.73■□□□□ 0.59
Hmg20aQ9DC33 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmg20aQ9DC33 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmg20aQ9DC33 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmg20aQ9DC33 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmg20aQ9DC33 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Hmg20aQ9DC33 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hmg20aQ9DC33 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
Hmg20aQ9DC33 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hmg20aQ9DC33 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hmg20aQ9DC33 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hmg20aQ9DC33 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Hmg20aQ9DC33 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.71■□□□□ 0.59
Hmg20aQ9DC33 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.71■□□□□ 0.59
Hmg20aQ9DC33 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hmg20aQ9DC33 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hmg20aQ9DC33 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hmg20aQ9DC33 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hmg20aQ9DC33 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hmg20aQ9DC33 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.7■□□□□ 0.58
Hmg20aQ9DC33 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hmg20aQ9DC33 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.7■□□□□ 0.58
Hmg20aQ9DC33 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hmg20aQ9DC33 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hmg20aQ9DC33 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hmg20aQ9DC33 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hmg20aQ9DC33 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.69■□□□□ 0.58
Hmg20aQ9DC33 Gm4799-201ENSMUST00000095396 657 ntBASIC18.69■□□□□ 0.58
Hmg20aQ9DC33 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hmg20aQ9DC33 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hmg20aQ9DC33 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hmg20aQ9DC33 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hmg20aQ9DC33 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.69■□□□□ 0.58
Hmg20aQ9DC33 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hmg20aQ9DC33 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hmg20aQ9DC33 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Hmg20aQ9DC33 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hmg20aQ9DC33 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Hmg20aQ9DC33 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hmg20aQ9DC33 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms