Protein–RNA interactions for Protein: Q9D6J4

Necab3, N-terminal EF-hand calcium-binding protein 3, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Necab3Q9D6J4 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Necab3Q9D6J4 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Necab3Q9D6J4 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Necab3Q9D6J4 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Necab3Q9D6J4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Necab3Q9D6J4 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.04■□□□□ 0.96
Necab3Q9D6J4 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Necab3Q9D6J4 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.04■□□□□ 0.96
Necab3Q9D6J4 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Necab3Q9D6J4 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Necab3Q9D6J4 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
Necab3Q9D6J4 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.04■□□□□ 0.96
Necab3Q9D6J4 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Necab3Q9D6J4 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.03■□□□□ 0.96
Necab3Q9D6J4 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Necab3Q9D6J4 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.03■□□□□ 0.96
Necab3Q9D6J4 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Necab3Q9D6J4 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.03■□□□□ 0.96
Necab3Q9D6J4 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Necab3Q9D6J4 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.03■□□□□ 0.96
Necab3Q9D6J4 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Necab3Q9D6J4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Necab3Q9D6J4 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Necab3Q9D6J4 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Necab3Q9D6J4 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Necab3Q9D6J4 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Necab3Q9D6J4 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Necab3Q9D6J4 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Necab3Q9D6J4 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Necab3Q9D6J4 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Necab3Q9D6J4 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Necab3Q9D6J4 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Necab3Q9D6J4 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
Necab3Q9D6J4 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Necab3Q9D6J4 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.01■□□□□ 0.95
Necab3Q9D6J4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Necab3Q9D6J4 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.01■□□□□ 0.95
Necab3Q9D6J4 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Necab3Q9D6J4 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Necab3Q9D6J4 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21■□□□□ 0.95
Necab3Q9D6J4 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Necab3Q9D6J4 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Necab3Q9D6J4 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
Necab3Q9D6J4 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Necab3Q9D6J4 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21■□□□□ 0.95
Necab3Q9D6J4 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21■□□□□ 0.95
Necab3Q9D6J4 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Necab3Q9D6J4 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Necab3Q9D6J4 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Necab3Q9D6J4 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Necab3Q9D6J4 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Necab3Q9D6J4 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Necab3Q9D6J4 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.99■□□□□ 0.95
Necab3Q9D6J4 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Necab3Q9D6J4 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Necab3Q9D6J4 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Necab3Q9D6J4 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Necab3Q9D6J4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Necab3Q9D6J4 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Necab3Q9D6J4 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.98■□□□□ 0.95
Necab3Q9D6J4 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Necab3Q9D6J4 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Necab3Q9D6J4 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Necab3Q9D6J4 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Necab3Q9D6J4 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Necab3Q9D6J4 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Necab3Q9D6J4 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.98■□□□□ 0.95
Necab3Q9D6J4 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.98■□□□□ 0.95
Necab3Q9D6J4 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Necab3Q9D6J4 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Necab3Q9D6J4 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Necab3Q9D6J4 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Necab3Q9D6J4 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Necab3Q9D6J4 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
Necab3Q9D6J4 Gm8493-201ENSMUST00000196881 489 ntBASIC20.97■□□□□ 0.95
Necab3Q9D6J4 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Necab3Q9D6J4 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Necab3Q9D6J4 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Necab3Q9D6J4 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Necab3Q9D6J4 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.96■□□□□ 0.95
Necab3Q9D6J4 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.96■□□□□ 0.95
Necab3Q9D6J4 Gm43017-201ENSMUST00000198296 752 ntBASIC20.96■□□□□ 0.95
Necab3Q9D6J4 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.96■□□□□ 0.95
Necab3Q9D6J4 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Necab3Q9D6J4 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Necab3Q9D6J4 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Necab3Q9D6J4 Gm43530-201ENSMUST00000195920 274 ntBASIC20.95■□□□□ 0.94
Necab3Q9D6J4 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Necab3Q9D6J4 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.95■□□□□ 0.94
Necab3Q9D6J4 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Necab3Q9D6J4 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Necab3Q9D6J4 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Necab3Q9D6J4 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.94■□□□□ 0.94
Necab3Q9D6J4 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.94■□□□□ 0.94
Necab3Q9D6J4 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Necab3Q9D6J4 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Necab3Q9D6J4 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Necab3Q9D6J4 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Necab3Q9D6J4 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Necab3Q9D6J4 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 96 ms