Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trim33Q99PP7 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim33Q99PP7 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.39■□□□□ 0.85
Trim33Q99PP7 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.39■□□□□ 0.85
Trim33Q99PP7 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim33Q99PP7 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim33Q99PP7 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim33Q99PP7 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim33Q99PP7 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim33Q99PP7 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Trim33Q99PP7 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Trim33Q99PP7 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim33Q99PP7 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim33Q99PP7 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
Trim33Q99PP7 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Trim33Q99PP7 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim33Q99PP7 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.38■□□□□ 0.85
Trim33Q99PP7 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.38■□□□□ 0.85
Trim33Q99PP7 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Trim33Q99PP7 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim33Q99PP7 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim33Q99PP7 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim33Q99PP7 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trim33Q99PP7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim33Q99PP7 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim33Q99PP7 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Trim33Q99PP7 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.37■□□□□ 0.85
Trim33Q99PP7 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.37■□□□□ 0.85
Trim33Q99PP7 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trim33Q99PP7 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.37■□□□□ 0.85
Trim33Q99PP7 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trim33Q99PP7 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.37■□□□□ 0.85
Trim33Q99PP7 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim33Q99PP7 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
Trim33Q99PP7 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.37■□□□□ 0.85
Trim33Q99PP7 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim33Q99PP7 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Trim33Q99PP7 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim33Q99PP7 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.36■□□□□ 0.85
Trim33Q99PP7 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.36■□□□□ 0.85
Trim33Q99PP7 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trim33Q99PP7 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim33Q99PP7 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim33Q99PP7 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Trim33Q99PP7 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.35■□□□□ 0.85
Trim33Q99PP7 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim33Q99PP7 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim33Q99PP7 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim33Q99PP7 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Trim33Q99PP7 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trim33Q99PP7 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim33Q99PP7 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim33Q99PP7 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim33Q99PP7 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim33Q99PP7 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trim33Q99PP7 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim33Q99PP7 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim33Q99PP7 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.33■□□□□ 0.85
Trim33Q99PP7 Gm40881-201ENSMUST00000223397 166 ntBASIC20.33■□□□□ 0.85
Trim33Q99PP7 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim33Q99PP7 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trim33Q99PP7 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.33■□□□□ 0.84
Trim33Q99PP7 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Trim33Q99PP7 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.33■□□□□ 0.84
Trim33Q99PP7 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Trim33Q99PP7 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim33Q99PP7 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.32■□□□□ 0.84
Trim33Q99PP7 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Trim33Q99PP7 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Trim33Q99PP7 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trim33Q99PP7 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim33Q99PP7 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.31■□□□□ 0.84
Trim33Q99PP7 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim33Q99PP7 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim33Q99PP7 Gm9959-201ENSMUST00000068277 390 ntBASIC20.31■□□□□ 0.84
Trim33Q99PP7 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Trim33Q99PP7 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim33Q99PP7 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim33Q99PP7 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim33Q99PP7 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim33Q99PP7 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Trim33Q99PP7 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.3■□□□□ 0.84
Trim33Q99PP7 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim33Q99PP7 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim33Q99PP7 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.3■□□□□ 0.84
Trim33Q99PP7 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim33Q99PP7 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim33Q99PP7 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim33Q99PP7 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim33Q99PP7 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim33Q99PP7 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim33Q99PP7 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim33Q99PP7 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim33Q99PP7 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim33Q99PP7 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Trim33Q99PP7 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim33Q99PP7 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Trim33Q99PP7 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Trim33Q99PP7 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim33Q99PP7 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms