Protein–RNA interactions for Protein: Q99NB8

Ubqln4, Ubiquilin-4, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln4Q99NB8 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.8■□□□□ 0.6
Ubqln4Q99NB8 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.8■□□□□ 0.6
Ubqln4Q99NB8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ubqln4Q99NB8 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Ubqln4Q99NB8 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ubqln4Q99NB8 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ubqln4Q99NB8 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ubqln4Q99NB8 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ubqln4Q99NB8 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.79■□□□□ 0.6
Ubqln4Q99NB8 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ubqln4Q99NB8 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ubqln4Q99NB8 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.78■□□□□ 0.6
Ubqln4Q99NB8 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.78■□□□□ 0.6
Ubqln4Q99NB8 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.78■□□□□ 0.6
Ubqln4Q99NB8 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ubqln4Q99NB8 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ubqln4Q99NB8 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ubqln4Q99NB8 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ubqln4Q99NB8 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.77■□□□□ 0.6
Ubqln4Q99NB8 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ubqln4Q99NB8 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ubqln4Q99NB8 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ubqln4Q99NB8 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ubqln4Q99NB8 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ubqln4Q99NB8 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ubqln4Q99NB8 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.77■□□□□ 0.59
Ubqln4Q99NB8 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ubqln4Q99NB8 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ubqln4Q99NB8 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ubqln4Q99NB8 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ubqln4Q99NB8 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ubqln4Q99NB8 Gm5812-201ENSMUST00000061073 957 ntBASIC18.76■□□□□ 0.59
Ubqln4Q99NB8 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ubqln4Q99NB8 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Ubqln4Q99NB8 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ubqln4Q99NB8 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ubqln4Q99NB8 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.76■□□□□ 0.59
Ubqln4Q99NB8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ubqln4Q99NB8 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ubqln4Q99NB8 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
Ubqln4Q99NB8 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ubqln4Q99NB8 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Ubqln4Q99NB8 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.75■□□□□ 0.59
Ubqln4Q99NB8 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ubqln4Q99NB8 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ubqln4Q99NB8 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ubqln4Q99NB8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ubqln4Q99NB8 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ubqln4Q99NB8 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.74■□□□□ 0.59
Ubqln4Q99NB8 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ubqln4Q99NB8 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ubqln4Q99NB8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ubqln4Q99NB8 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ubqln4Q99NB8 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ubqln4Q99NB8 Gm15820-201ENSMUST00000201566 728 ntBASIC18.73■□□□□ 0.59
Ubqln4Q99NB8 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.73■□□□□ 0.59
Ubqln4Q99NB8 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ubqln4Q99NB8 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ubqln4Q99NB8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Ubqln4Q99NB8 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Ubqln4Q99NB8 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ubqln4Q99NB8 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ubqln4Q99NB8 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ubqln4Q99NB8 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ubqln4Q99NB8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ubqln4Q99NB8 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ubqln4Q99NB8 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ubqln4Q99NB8 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ubqln4Q99NB8 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ubqln4Q99NB8 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ubqln4Q99NB8 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Ubqln4Q99NB8 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Ubqln4Q99NB8 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.71■□□□□ 0.59
Ubqln4Q99NB8 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.71■□□□□ 0.59
Ubqln4Q99NB8 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ubqln4Q99NB8 Gm15546-201ENSMUST00000122095 826 ntBASIC18.7■□□□□ 0.58
Ubqln4Q99NB8 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ubqln4Q99NB8 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ubqln4Q99NB8 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Ubqln4Q99NB8 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ubqln4Q99NB8 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.7■□□□□ 0.58
Ubqln4Q99NB8 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ubqln4Q99NB8 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ubqln4Q99NB8 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ubqln4Q99NB8 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
Ubqln4Q99NB8 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Ubqln4Q99NB8 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.69■□□□□ 0.58
Ubqln4Q99NB8 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.69■□□□□ 0.58
Ubqln4Q99NB8 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.69■□□□□ 0.58
Ubqln4Q99NB8 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ubqln4Q99NB8 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Ubqln4Q99NB8 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ubqln4Q99NB8 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ubqln4Q99NB8 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ubqln4Q99NB8 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ubqln4Q99NB8 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ubqln4Q99NB8 Gm40881-201ENSMUST00000223397 166 ntBASIC18.68■□□□□ 0.58
Ubqln4Q99NB8 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ubqln4Q99NB8 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ubqln4Q99NB8 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms