Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Raf1Q99N57 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Raf1Q99N57 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Raf1Q99N57 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Raf1Q99N57 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Raf1Q99N57 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Raf1Q99N57 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
Raf1Q99N57 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Raf1Q99N57 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Raf1Q99N57 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Raf1Q99N57 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Raf1Q99N57 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Raf1Q99N57 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.41■□□□□ 0.54
Raf1Q99N57 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Raf1Q99N57 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Raf1Q99N57 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Raf1Q99N57 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Raf1Q99N57 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Raf1Q99N57 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Raf1Q99N57 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Raf1Q99N57 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Raf1Q99N57 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Raf1Q99N57 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Raf1Q99N57 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Raf1Q99N57 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Raf1Q99N57 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Raf1Q99N57 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Raf1Q99N57 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Raf1Q99N57 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Raf1Q99N57 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Raf1Q99N57 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Raf1Q99N57 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Raf1Q99N57 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Raf1Q99N57 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.39■□□□□ 0.53
Raf1Q99N57 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Raf1Q99N57 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.39■□□□□ 0.53
Raf1Q99N57 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.39■□□□□ 0.53
Raf1Q99N57 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Raf1Q99N57 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Raf1Q99N57 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.38■□□□□ 0.53
Raf1Q99N57 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Raf1Q99N57 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.38■□□□□ 0.53
Raf1Q99N57 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Raf1Q99N57 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.38■□□□□ 0.53
Raf1Q99N57 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.38■□□□□ 0.53
Raf1Q99N57 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.38■□□□□ 0.53
Raf1Q99N57 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Raf1Q99N57 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Raf1Q99N57 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Raf1Q99N57 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Raf1Q99N57 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Raf1Q99N57 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Raf1Q99N57 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.37■□□□□ 0.53
Raf1Q99N57 Gm43566-201ENSMUST00000196851 808 ntBASIC18.37■□□□□ 0.53
Raf1Q99N57 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Raf1Q99N57 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Raf1Q99N57 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Raf1Q99N57 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Raf1Q99N57 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Raf1Q99N57 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Raf1Q99N57 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Raf1Q99N57 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Raf1Q99N57 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Raf1Q99N57 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Raf1Q99N57 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Raf1Q99N57 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Raf1Q99N57 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Raf1Q99N57 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Raf1Q99N57 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Raf1Q99N57 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Raf1Q99N57 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Raf1Q99N57 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Raf1Q99N57 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Raf1Q99N57 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Raf1Q99N57 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Raf1Q99N57 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Raf1Q99N57 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Raf1Q99N57 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Raf1Q99N57 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Raf1Q99N57 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Raf1Q99N57 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Raf1Q99N57 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.34■□□□□ 0.53
Raf1Q99N57 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Raf1Q99N57 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Raf1Q99N57 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Raf1Q99N57 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Raf1Q99N57 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Raf1Q99N57 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.33■□□□□ 0.53
Raf1Q99N57 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Raf1Q99N57 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Raf1Q99N57 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.33■□□□□ 0.52
Raf1Q99N57 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Raf1Q99N57 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Raf1Q99N57 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.33■□□□□ 0.52
Raf1Q99N57 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Raf1Q99N57 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Raf1Q99N57 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Raf1Q99N57 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Raf1Q99N57 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Raf1Q99N57 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms