Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhb2Q91Y00 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Pcdhb2Q91Y00 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.94■■□□□ 1.1
Pcdhb2Q91Y00 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhb2Q91Y00 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhb2Q91Y00 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhb2Q91Y00 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhb2Q91Y00 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Pcdhb2Q91Y00 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhb2Q91Y00 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhb2Q91Y00 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.93■■□□□ 1.1
Pcdhb2Q91Y00 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.93■■□□□ 1.1
Pcdhb2Q91Y00 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhb2Q91Y00 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhb2Q91Y00 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhb2Q91Y00 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.93■■□□□ 1.1
Pcdhb2Q91Y00 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhb2Q91Y00 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhb2Q91Y00 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhb2Q91Y00 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhb2Q91Y00 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhb2Q91Y00 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.92■■□□□ 1.1
Pcdhb2Q91Y00 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
Pcdhb2Q91Y00 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhb2Q91Y00 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhb2Q91Y00 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.92■■□□□ 1.1
Pcdhb2Q91Y00 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.92■■□□□ 1.1
Pcdhb2Q91Y00 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Pcdhb2Q91Y00 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhb2Q91Y00 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhb2Q91Y00 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.91■■□□□ 1.1
Pcdhb2Q91Y00 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.91■■□□□ 1.1
Pcdhb2Q91Y00 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhb2Q91Y00 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Pcdhb2Q91Y00 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhb2Q91Y00 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhb2Q91Y00 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.9■■□□□ 1.1
Pcdhb2Q91Y00 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhb2Q91Y00 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhb2Q91Y00 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhb2Q91Y00 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhb2Q91Y00 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Pcdhb2Q91Y00 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Pcdhb2Q91Y00 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Pcdhb2Q91Y00 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhb2Q91Y00 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Pcdhb2Q91Y00 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhb2Q91Y00 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhb2Q91Y00 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhb2Q91Y00 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhb2Q91Y00 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Pcdhb2Q91Y00 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhb2Q91Y00 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhb2Q91Y00 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhb2Q91Y00 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.88■■□□□ 1.09
Pcdhb2Q91Y00 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhb2Q91Y00 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhb2Q91Y00 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.87■■□□□ 1.09
Pcdhb2Q91Y00 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Pcdhb2Q91Y00 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhb2Q91Y00 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhb2Q91Y00 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.87■■□□□ 1.09
Pcdhb2Q91Y00 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.87■■□□□ 1.09
Pcdhb2Q91Y00 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhb2Q91Y00 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.87■■□□□ 1.09
Pcdhb2Q91Y00 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.87■■□□□ 1.09
Pcdhb2Q91Y00 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhb2Q91Y00 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhb2Q91Y00 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhb2Q91Y00 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhb2Q91Y00 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhb2Q91Y00 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.85■■□□□ 1.09
Pcdhb2Q91Y00 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb2Q91Y00 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.85■■□□□ 1.09
Pcdhb2Q91Y00 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb2Q91Y00 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb2Q91Y00 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb2Q91Y00 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb2Q91Y00 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb2Q91Y00 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb2Q91Y00 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhb2Q91Y00 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhb2Q91Y00 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhb2Q91Y00 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhb2Q91Y00 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdhb2Q91Y00 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdhb2Q91Y00 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhb2Q91Y00 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Pcdhb2Q91Y00 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhb2Q91Y00 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhb2Q91Y00 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.82■■□□□ 1.08
Pcdhb2Q91Y00 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.82■■□□□ 1.08
Pcdhb2Q91Y00 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhb2Q91Y00 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhb2Q91Y00 Gm9847-201ENSMUST00000052528 599 ntBASIC21.82■■□□□ 1.08
Pcdhb2Q91Y00 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
Pcdhb2Q91Y00 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhb2Q91Y00 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Pcdhb2Q91Y00 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhb2Q91Y00 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms