Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhgb1Q91XX8 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.49■■□□□ 1.03
Pcdhgb1Q91XX8 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.49■■□□□ 1.03
Pcdhgb1Q91XX8 Golgb1-201ENSMUST00000023534 498 ntBASIC21.49■■□□□ 1.03
Pcdhgb1Q91XX8 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhgb1Q91XX8 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhgb1Q91XX8 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhgb1Q91XX8 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhgb1Q91XX8 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.48■■□□□ 1.03
Pcdhgb1Q91XX8 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.48■■□□□ 1.03
Pcdhgb1Q91XX8 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhgb1Q91XX8 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.48■■□□□ 1.03
Pcdhgb1Q91XX8 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Pcdhgb1Q91XX8 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhgb1Q91XX8 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.47■■□□□ 1.03
Pcdhgb1Q91XX8 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhgb1Q91XX8 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Pcdhgb1Q91XX8 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Pcdhgb1Q91XX8 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.47■■□□□ 1.03
Pcdhgb1Q91XX8 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.47■■□□□ 1.03
Pcdhgb1Q91XX8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.47■■□□□ 1.03
Pcdhgb1Q91XX8 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.46■■□□□ 1.03
Pcdhgb1Q91XX8 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhgb1Q91XX8 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhgb1Q91XX8 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.46■■□□□ 1.03
Pcdhgb1Q91XX8 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Pcdhgb1Q91XX8 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhgb1Q91XX8 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhgb1Q91XX8 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhgb1Q91XX8 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhgb1Q91XX8 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhgb1Q91XX8 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.44■■□□□ 1.02
Pcdhgb1Q91XX8 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.44■■□□□ 1.02
Pcdhgb1Q91XX8 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.44■■□□□ 1.02
Pcdhgb1Q91XX8 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhgb1Q91XX8 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhgb1Q91XX8 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhgb1Q91XX8 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.43■■□□□ 1.02
Pcdhgb1Q91XX8 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhgb1Q91XX8 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhgb1Q91XX8 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhgb1Q91XX8 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhgb1Q91XX8 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhgb1Q91XX8 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhgb1Q91XX8 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhgb1Q91XX8 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhgb1Q91XX8 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhgb1Q91XX8 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhgb1Q91XX8 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhgb1Q91XX8 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhgb1Q91XX8 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.41■■□□□ 1.02
Pcdhgb1Q91XX8 Gm9870-201ENSMUST00000063874 645 ntBASIC21.41■■□□□ 1.02
Pcdhgb1Q91XX8 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhgb1Q91XX8 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhgb1Q91XX8 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhgb1Q91XX8 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhgb1Q91XX8 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhgb1Q91XX8 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhgb1Q91XX8 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.4■■□□□ 1.02
Pcdhgb1Q91XX8 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhgb1Q91XX8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhgb1Q91XX8 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhgb1Q91XX8 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhgb1Q91XX8 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhgb1Q91XX8 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdhgb1Q91XX8 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdhgb1Q91XX8 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
Pcdhgb1Q91XX8 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhgb1Q91XX8 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhgb1Q91XX8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.39■■□□□ 1.01
Pcdhgb1Q91XX8 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhgb1Q91XX8 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Pcdhgb1Q91XX8 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhgb1Q91XX8 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhgb1Q91XX8 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhgb1Q91XX8 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhgb1Q91XX8 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
Pcdhgb1Q91XX8 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhgb1Q91XX8 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Pcdhgb1Q91XX8 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhgb1Q91XX8 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhgb1Q91XX8 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Pcdhgb1Q91XX8 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.37■■□□□ 1.01
Pcdhgb1Q91XX8 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.37■■□□□ 1.01
Pcdhgb1Q91XX8 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhgb1Q91XX8 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhgb1Q91XX8 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhgb1Q91XX8 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhgb1Q91XX8 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhgb1Q91XX8 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.36■■□□□ 1.01
Pcdhgb1Q91XX8 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhgb1Q91XX8 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhgb1Q91XX8 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhgb1Q91XX8 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.35■■□□□ 1.01
Pcdhgb1Q91XX8 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhgb1Q91XX8 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhgb1Q91XX8 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.35■■□□□ 1.01
Pcdhgb1Q91XX8 Gm27454-201ENSMUST00000185090 204 ntBASIC21.35■■□□□ 1.01
Pcdhgb1Q91XX8 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhgb1Q91XX8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms