Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ddx41Q91VN6 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC23.61■■□□□ 1.37
Ddx41Q91VN6 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ddx41Q91VN6 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ddx41Q91VN6 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ddx41Q91VN6 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx41Q91VN6 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC23.6■■□□□ 1.37
Ddx41Q91VN6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx41Q91VN6 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx41Q91VN6 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
Ddx41Q91VN6 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx41Q91VN6 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx41Q91VN6 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC23.6■■□□□ 1.37
Ddx41Q91VN6 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx41Q91VN6 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx41Q91VN6 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx41Q91VN6 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC23.6■■□□□ 1.37
Ddx41Q91VN6 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ddx41Q91VN6 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ddx41Q91VN6 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC23.59■■□□□ 1.37
Ddx41Q91VN6 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Ddx41Q91VN6 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC23.59■■□□□ 1.37
Ddx41Q91VN6 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Ddx41Q91VN6 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ddx41Q91VN6 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Ddx41Q91VN6 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC23.59■■□□□ 1.37
Ddx41Q91VN6 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC23.59■■□□□ 1.37
Ddx41Q91VN6 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ddx41Q91VN6 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ddx41Q91VN6 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ddx41Q91VN6 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
Ddx41Q91VN6 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ddx41Q91VN6 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
Ddx41Q91VN6 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC23.58■■□□□ 1.36
Ddx41Q91VN6 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
Ddx41Q91VN6 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ddx41Q91VN6 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC23.57■■□□□ 1.36
Ddx41Q91VN6 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ddx41Q91VN6 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ddx41Q91VN6 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ddx41Q91VN6 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ddx41Q91VN6 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ddx41Q91VN6 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC23.57■■□□□ 1.36
Ddx41Q91VN6 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC23.57■■□□□ 1.36
Ddx41Q91VN6 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ddx41Q91VN6 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ddx41Q91VN6 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Ddx41Q91VN6 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ddx41Q91VN6 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ddx41Q91VN6 AC158990.1-201ENSMUST00000221450 2016 ntBASIC23.56■■□□□ 1.36
Ddx41Q91VN6 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ddx41Q91VN6 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC23.56■■□□□ 1.36
Ddx41Q91VN6 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
Ddx41Q91VN6 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ddx41Q91VN6 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ddx41Q91VN6 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC23.55■■□□□ 1.36
Ddx41Q91VN6 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ddx41Q91VN6 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ddx41Q91VN6 Gm12504-201ENSMUST00000120860 2231 ntBASIC23.55■■□□□ 1.36
Ddx41Q91VN6 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ddx41Q91VN6 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ddx41Q91VN6 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ddx41Q91VN6 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Ddx41Q91VN6 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC23.54■■□□□ 1.36
Ddx41Q91VN6 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ddx41Q91VN6 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC23.53■■□□□ 1.36
Ddx41Q91VN6 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ddx41Q91VN6 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ddx41Q91VN6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC23.52■■□□□ 1.36
Ddx41Q91VN6 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ddx41Q91VN6 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ddx41Q91VN6 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ddx41Q91VN6 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ddx41Q91VN6 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ddx41Q91VN6 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC23.52■■□□□ 1.36
Ddx41Q91VN6 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ddx41Q91VN6 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ddx41Q91VN6 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
Ddx41Q91VN6 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC23.51■■□□□ 1.35
Ddx41Q91VN6 AC116713.1-201ENSMUST00000215074 430 ntBASIC23.51■■□□□ 1.35
Ddx41Q91VN6 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ddx41Q91VN6 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Ddx41Q91VN6 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ddx41Q91VN6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Ddx41Q91VN6 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
Ddx41Q91VN6 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Ddx41Q91VN6 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
Ddx41Q91VN6 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC23.5■■□□□ 1.35
Ddx41Q91VN6 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC23.5■■□□□ 1.35
Ddx41Q91VN6 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ddx41Q91VN6 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Ddx41Q91VN6 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ddx41Q91VN6 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC23.49■■□□□ 1.35
Ddx41Q91VN6 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC23.49■■□□□ 1.35
Ddx41Q91VN6 Gm10616-201ENSMUST00000205285 2127 ntBASIC23.49■■□□□ 1.35
Ddx41Q91VN6 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC23.49■■□□□ 1.35
Ddx41Q91VN6 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Ddx41Q91VN6 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
Ddx41Q91VN6 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Ddx41Q91VN6 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC23.48■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 109.8 ms