Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Trim60Q8VI40 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trim60Q8VI40 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim60Q8VI40 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim60Q8VI40 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim60Q8VI40 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trim60Q8VI40 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.34■■□□□ 1.01
Trim60Q8VI40 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.34■■□□□ 1.01
Trim60Q8VI40 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim60Q8VI40 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim60Q8VI40 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim60Q8VI40 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Trim60Q8VI40 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim60Q8VI40 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim60Q8VI40 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim60Q8VI40 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Trim60Q8VI40 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.33■■□□□ 1.01
Trim60Q8VI40 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Trim60Q8VI40 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim60Q8VI40 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.33■■□□□ 1.01
Trim60Q8VI40 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.33■■□□□ 1.01
Trim60Q8VI40 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
Trim60Q8VI40 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim60Q8VI40 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim60Q8VI40 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Trim60Q8VI40 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trim60Q8VI40 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Trim60Q8VI40 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Trim60Q8VI40 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim60Q8VI40 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim60Q8VI40 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Trim60Q8VI40 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim60Q8VI40 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.31■■□□□ 1
Trim60Q8VI40 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.31■■□□□ 1
Trim60Q8VI40 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim60Q8VI40 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trim60Q8VI40 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Trim60Q8VI40 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trim60Q8VI40 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Trim60Q8VI40 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim60Q8VI40 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trim60Q8VI40 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim60Q8VI40 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.29■■□□□ 1
Trim60Q8VI40 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Trim60Q8VI40 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.29■■□□□ 1
Trim60Q8VI40 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim60Q8VI40 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim60Q8VI40 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim60Q8VI40 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim60Q8VI40 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Trim60Q8VI40 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.28■■□□□ 1
Trim60Q8VI40 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.28■■□□□ 1
Trim60Q8VI40 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim60Q8VI40 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.28■■□□□ 1
Trim60Q8VI40 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Trim60Q8VI40 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim60Q8VI40 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Trim60Q8VI40 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim60Q8VI40 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.28■■□□□ 1
Trim60Q8VI40 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trim60Q8VI40 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.27■■□□□ 1
Trim60Q8VI40 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.27■■□□□ 1
Trim60Q8VI40 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim60Q8VI40 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim60Q8VI40 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Trim60Q8VI40 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trim60Q8VI40 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim60Q8VI40 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Trim60Q8VI40 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
Trim60Q8VI40 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim60Q8VI40 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Trim60Q8VI40 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.26■□□□□ 0.99
Trim60Q8VI40 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.26■□□□□ 0.99
Trim60Q8VI40 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Trim60Q8VI40 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim60Q8VI40 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim60Q8VI40 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim60Q8VI40 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim60Q8VI40 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Trim60Q8VI40 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim60Q8VI40 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim60Q8VI40 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trim60Q8VI40 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Trim60Q8VI40 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Trim60Q8VI40 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.25■□□□□ 0.99
Trim60Q8VI40 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim60Q8VI40 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
Trim60Q8VI40 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim60Q8VI40 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trim60Q8VI40 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trim60Q8VI40 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim60Q8VI40 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Trim60Q8VI40 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trim60Q8VI40 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Trim60Q8VI40 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim60Q8VI40 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trim60Q8VI40 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim60Q8VI40 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim60Q8VI40 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim60Q8VI40 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms