Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.57■□□□□ 0.88
Zcchc9Q8R1J3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zcchc9Q8R1J3 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zcchc9Q8R1J3 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zcchc9Q8R1J3 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Zcchc9Q8R1J3 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zcchc9Q8R1J3 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.57■□□□□ 0.88
Zcchc9Q8R1J3 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zcchc9Q8R1J3 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Zcchc9Q8R1J3 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Zcchc9Q8R1J3 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.56■□□□□ 0.88
Zcchc9Q8R1J3 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zcchc9Q8R1J3 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zcchc9Q8R1J3 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zcchc9Q8R1J3 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zcchc9Q8R1J3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Zcchc9Q8R1J3 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Zcchc9Q8R1J3 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Zcchc9Q8R1J3 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Zcchc9Q8R1J3 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Zcchc9Q8R1J3 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.55■□□□□ 0.88
Zcchc9Q8R1J3 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Zcchc9Q8R1J3 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Zcchc9Q8R1J3 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Zcchc9Q8R1J3 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.54■□□□□ 0.88
Zcchc9Q8R1J3 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zcchc9Q8R1J3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Zcchc9Q8R1J3 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zcchc9Q8R1J3 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Zcchc9Q8R1J3 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zcchc9Q8R1J3 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.54■□□□□ 0.88
Zcchc9Q8R1J3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
Zcchc9Q8R1J3 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Zcchc9Q8R1J3 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Zcchc9Q8R1J3 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.53■□□□□ 0.88
Zcchc9Q8R1J3 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.53■□□□□ 0.88
Zcchc9Q8R1J3 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Zcchc9Q8R1J3 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Zcchc9Q8R1J3 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Zcchc9Q8R1J3 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Zcchc9Q8R1J3 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.52■□□□□ 0.88
Zcchc9Q8R1J3 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.52■□□□□ 0.88
Zcchc9Q8R1J3 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Zcchc9Q8R1J3 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Zcchc9Q8R1J3 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Zcchc9Q8R1J3 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Zcchc9Q8R1J3 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Zcchc9Q8R1J3 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Zcchc9Q8R1J3 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Zcchc9Q8R1J3 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Zcchc9Q8R1J3 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Zcchc9Q8R1J3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Zcchc9Q8R1J3 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.51■□□□□ 0.87
Zcchc9Q8R1J3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Zcchc9Q8R1J3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Zcchc9Q8R1J3 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Zcchc9Q8R1J3 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Zcchc9Q8R1J3 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.5■□□□□ 0.87
Zcchc9Q8R1J3 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
Zcchc9Q8R1J3 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Zcchc9Q8R1J3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Zcchc9Q8R1J3 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.49■□□□□ 0.87
Zcchc9Q8R1J3 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Zcchc9Q8R1J3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Zcchc9Q8R1J3 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Zcchc9Q8R1J3 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Zcchc9Q8R1J3 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
Zcchc9Q8R1J3 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Zcchc9Q8R1J3 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Zcchc9Q8R1J3 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Zcchc9Q8R1J3 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Zcchc9Q8R1J3 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Zcchc9Q8R1J3 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Zcchc9Q8R1J3 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Zcchc9Q8R1J3 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.49■□□□□ 0.87
Zcchc9Q8R1J3 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Zcchc9Q8R1J3 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Zcchc9Q8R1J3 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Zcchc9Q8R1J3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Zcchc9Q8R1J3 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Zcchc9Q8R1J3 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Zcchc9Q8R1J3 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.47■□□□□ 0.87
Zcchc9Q8R1J3 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Zcchc9Q8R1J3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Zcchc9Q8R1J3 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Zcchc9Q8R1J3 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Zcchc9Q8R1J3 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Zcchc9Q8R1J3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Zcchc9Q8R1J3 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Zcchc9Q8R1J3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Zcchc9Q8R1J3 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Zcchc9Q8R1J3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Zcchc9Q8R1J3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Zcchc9Q8R1J3 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Zcchc9Q8R1J3 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Zcchc9Q8R1J3 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.46■□□□□ 0.87
Zcchc9Q8R1J3 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Zcchc9Q8R1J3 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Zcchc9Q8R1J3 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Zcchc9Q8R1J3 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms