Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3rf2Q8BZT2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3rf2Q8BZT2 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3rf2Q8BZT2 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Sh3rf2Q8BZT2 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3rf2Q8BZT2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Sh3rf2Q8BZT2 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.04■□□□□ 0.96
Sh3rf2Q8BZT2 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sh3rf2Q8BZT2 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sh3rf2Q8BZT2 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Sh3rf2Q8BZT2 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sh3rf2Q8BZT2 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sh3rf2Q8BZT2 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Sh3rf2Q8BZT2 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sh3rf2Q8BZT2 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.02■□□□□ 0.96
Sh3rf2Q8BZT2 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sh3rf2Q8BZT2 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sh3rf2Q8BZT2 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sh3rf2Q8BZT2 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sh3rf2Q8BZT2 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.02■□□□□ 0.96
Sh3rf2Q8BZT2 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Sh3rf2Q8BZT2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Sh3rf2Q8BZT2 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sh3rf2Q8BZT2 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
Sh3rf2Q8BZT2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Sh3rf2Q8BZT2 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sh3rf2Q8BZT2 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Sh3rf2Q8BZT2 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.01■□□□□ 0.95
Sh3rf2Q8BZT2 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sh3rf2Q8BZT2 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.01■□□□□ 0.95
Sh3rf2Q8BZT2 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sh3rf2Q8BZT2 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sh3rf2Q8BZT2 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sh3rf2Q8BZT2 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sh3rf2Q8BZT2 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Sh3rf2Q8BZT2 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sh3rf2Q8BZT2 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Sh3rf2Q8BZT2 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sh3rf2Q8BZT2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sh3rf2Q8BZT2 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Sh3rf2Q8BZT2 Serp2-204ENSMUST00000228055 705 ntBASIC21■□□□□ 0.95
Sh3rf2Q8BZT2 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sh3rf2Q8BZT2 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sh3rf2Q8BZT2 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sh3rf2Q8BZT2 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sh3rf2Q8BZT2 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Sh3rf2Q8BZT2 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sh3rf2Q8BZT2 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sh3rf2Q8BZT2 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sh3rf2Q8BZT2 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sh3rf2Q8BZT2 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sh3rf2Q8BZT2 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.99■□□□□ 0.95
Sh3rf2Q8BZT2 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sh3rf2Q8BZT2 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sh3rf2Q8BZT2 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sh3rf2Q8BZT2 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sh3rf2Q8BZT2 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Sh3rf2Q8BZT2 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sh3rf2Q8BZT2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.98■□□□□ 0.95
Sh3rf2Q8BZT2 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Sh3rf2Q8BZT2 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sh3rf2Q8BZT2 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sh3rf2Q8BZT2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sh3rf2Q8BZT2 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sh3rf2Q8BZT2 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Sh3rf2Q8BZT2 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Sh3rf2Q8BZT2 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.97■□□□□ 0.95
Sh3rf2Q8BZT2 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.97■□□□□ 0.95
Sh3rf2Q8BZT2 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.97■□□□□ 0.95
Sh3rf2Q8BZT2 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.97■□□□□ 0.95
Sh3rf2Q8BZT2 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sh3rf2Q8BZT2 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sh3rf2Q8BZT2 Gm43137-201ENSMUST00000198052 594 ntBASIC20.96■□□□□ 0.95
Sh3rf2Q8BZT2 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.96■□□□□ 0.95
Sh3rf2Q8BZT2 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sh3rf2Q8BZT2 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sh3rf2Q8BZT2 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Sh3rf2Q8BZT2 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Sh3rf2Q8BZT2 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.94■□□□□ 0.94
Sh3rf2Q8BZT2 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Sh3rf2Q8BZT2 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Sh3rf2Q8BZT2 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sh3rf2Q8BZT2 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Sh3rf2Q8BZT2 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sh3rf2Q8BZT2 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.93■□□□□ 0.94
Sh3rf2Q8BZT2 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sh3rf2Q8BZT2 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sh3rf2Q8BZT2 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sh3rf2Q8BZT2 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sh3rf2Q8BZT2 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sh3rf2Q8BZT2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sh3rf2Q8BZT2 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sh3rf2Q8BZT2 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sh3rf2Q8BZT2 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sh3rf2Q8BZT2 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sh3rf2Q8BZT2 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Sh3rf2Q8BZT2 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sh3rf2Q8BZT2 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sh3rf2Q8BZT2 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sh3rf2Q8BZT2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 94.9 ms