Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cpsf4Q8BQZ5 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cpsf4Q8BQZ5 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cpsf4Q8BQZ5 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.96■□□□□ 0.79
Cpsf4Q8BQZ5 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cpsf4Q8BQZ5 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Cpsf4Q8BQZ5 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cpsf4Q8BQZ5 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cpsf4Q8BQZ5 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cpsf4Q8BQZ5 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cpsf4Q8BQZ5 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cpsf4Q8BQZ5 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cpsf4Q8BQZ5 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cpsf4Q8BQZ5 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Cpsf4Q8BQZ5 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Cpsf4Q8BQZ5 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cpsf4Q8BQZ5 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cpsf4Q8BQZ5 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.94■□□□□ 0.78
Cpsf4Q8BQZ5 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.94■□□□□ 0.78
Cpsf4Q8BQZ5 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Cpsf4Q8BQZ5 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cpsf4Q8BQZ5 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cpsf4Q8BQZ5 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Cpsf4Q8BQZ5 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cpsf4Q8BQZ5 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Cpsf4Q8BQZ5 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cpsf4Q8BQZ5 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Cpsf4Q8BQZ5 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cpsf4Q8BQZ5 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cpsf4Q8BQZ5 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cpsf4Q8BQZ5 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Cpsf4Q8BQZ5 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.93■□□□□ 0.78
Cpsf4Q8BQZ5 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cpsf4Q8BQZ5 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cpsf4Q8BQZ5 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cpsf4Q8BQZ5 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cpsf4Q8BQZ5 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.92■□□□□ 0.78
Cpsf4Q8BQZ5 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
Cpsf4Q8BQZ5 Gm9959-201ENSMUST00000068277 390 ntBASIC19.92■□□□□ 0.78
Cpsf4Q8BQZ5 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cpsf4Q8BQZ5 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cpsf4Q8BQZ5 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.92■□□□□ 0.78
Cpsf4Q8BQZ5 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.92■□□□□ 0.78
Cpsf4Q8BQZ5 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cpsf4Q8BQZ5 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cpsf4Q8BQZ5 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.91■□□□□ 0.78
Cpsf4Q8BQZ5 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cpsf4Q8BQZ5 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.91■□□□□ 0.78
Cpsf4Q8BQZ5 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cpsf4Q8BQZ5 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.91■□□□□ 0.78
Cpsf4Q8BQZ5 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cpsf4Q8BQZ5 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Cpsf4Q8BQZ5 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cpsf4Q8BQZ5 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cpsf4Q8BQZ5 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cpsf4Q8BQZ5 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cpsf4Q8BQZ5 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cpsf4Q8BQZ5 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cpsf4Q8BQZ5 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cpsf4Q8BQZ5 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cpsf4Q8BQZ5 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cpsf4Q8BQZ5 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cpsf4Q8BQZ5 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cpsf4Q8BQZ5 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cpsf4Q8BQZ5 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cpsf4Q8BQZ5 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.9■□□□□ 0.78
Cpsf4Q8BQZ5 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cpsf4Q8BQZ5 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cpsf4Q8BQZ5 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cpsf4Q8BQZ5 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cpsf4Q8BQZ5 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cpsf4Q8BQZ5 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Cpsf4Q8BQZ5 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.89■□□□□ 0.77
Cpsf4Q8BQZ5 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cpsf4Q8BQZ5 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Cpsf4Q8BQZ5 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Cpsf4Q8BQZ5 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cpsf4Q8BQZ5 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
Cpsf4Q8BQZ5 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cpsf4Q8BQZ5 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cpsf4Q8BQZ5 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Cpsf4Q8BQZ5 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cpsf4Q8BQZ5 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cpsf4Q8BQZ5 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cpsf4Q8BQZ5 Gm14117-201ENSMUST00000122417 843 ntBASIC19.88■□□□□ 0.77
Cpsf4Q8BQZ5 Gm45102-201ENSMUST00000207427 857 ntBASIC19.88■□□□□ 0.77
Cpsf4Q8BQZ5 Rps24-207ENSMUST00000224568 714 ntBASIC19.88■□□□□ 0.77
Cpsf4Q8BQZ5 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cpsf4Q8BQZ5 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Cpsf4Q8BQZ5 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cpsf4Q8BQZ5 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cpsf4Q8BQZ5 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpsf4Q8BQZ5 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.87■□□□□ 0.77
Cpsf4Q8BQZ5 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpsf4Q8BQZ5 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Cpsf4Q8BQZ5 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.87■□□□□ 0.77
Cpsf4Q8BQZ5 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpsf4Q8BQZ5 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Cpsf4Q8BQZ5 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpsf4Q8BQZ5 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms