Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.41■□□□□ 0.7
Atg4dQ8BGV9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.41■□□□□ 0.7
Atg4dQ8BGV9 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Atg4dQ8BGV9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atg4dQ8BGV9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atg4dQ8BGV9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atg4dQ8BGV9 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atg4dQ8BGV9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atg4dQ8BGV9 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Atg4dQ8BGV9 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atg4dQ8BGV9 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.4■□□□□ 0.7
Atg4dQ8BGV9 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.4■□□□□ 0.7
Atg4dQ8BGV9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Atg4dQ8BGV9 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Atg4dQ8BGV9 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atg4dQ8BGV9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atg4dQ8BGV9 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atg4dQ8BGV9 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Atg4dQ8BGV9 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Atg4dQ8BGV9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atg4dQ8BGV9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atg4dQ8BGV9 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atg4dQ8BGV9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atg4dQ8BGV9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Atg4dQ8BGV9 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Atg4dQ8BGV9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.38■□□□□ 0.69
Atg4dQ8BGV9 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Atg4dQ8BGV9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Atg4dQ8BGV9 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atg4dQ8BGV9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atg4dQ8BGV9 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atg4dQ8BGV9 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Atg4dQ8BGV9 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atg4dQ8BGV9 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atg4dQ8BGV9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Atg4dQ8BGV9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atg4dQ8BGV9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atg4dQ8BGV9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atg4dQ8BGV9 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.36■□□□□ 0.69
Atg4dQ8BGV9 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Atg4dQ8BGV9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
Atg4dQ8BGV9 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Atg4dQ8BGV9 Gm7143-201ENSMUST00000222811 859 ntBASIC19.35■□□□□ 0.69
Atg4dQ8BGV9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.34■□□□□ 0.69
Atg4dQ8BGV9 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.34■□□□□ 0.69
Atg4dQ8BGV9 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.34■□□□□ 0.69
Atg4dQ8BGV9 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.34■□□□□ 0.69
Atg4dQ8BGV9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.34■□□□□ 0.69
Atg4dQ8BGV9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
Atg4dQ8BGV9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Atg4dQ8BGV9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.33■□□□□ 0.69
Atg4dQ8BGV9 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Atg4dQ8BGV9 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.33■□□□□ 0.68
Atg4dQ8BGV9 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.33■□□□□ 0.68
Atg4dQ8BGV9 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
Atg4dQ8BGV9 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atg4dQ8BGV9 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atg4dQ8BGV9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atg4dQ8BGV9 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atg4dQ8BGV9 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Atg4dQ8BGV9 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Atg4dQ8BGV9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atg4dQ8BGV9 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.32■□□□□ 0.68
Atg4dQ8BGV9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Atg4dQ8BGV9 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atg4dQ8BGV9 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.32■□□□□ 0.68
Atg4dQ8BGV9 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.32■□□□□ 0.68
Atg4dQ8BGV9 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atg4dQ8BGV9 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atg4dQ8BGV9 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atg4dQ8BGV9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atg4dQ8BGV9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atg4dQ8BGV9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atg4dQ8BGV9 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.31■□□□□ 0.68
Atg4dQ8BGV9 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Atg4dQ8BGV9 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atg4dQ8BGV9 Gm9870-201ENSMUST00000063874 645 ntBASIC19.31■□□□□ 0.68
Atg4dQ8BGV9 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atg4dQ8BGV9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atg4dQ8BGV9 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.31■□□□□ 0.68
Atg4dQ8BGV9 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atg4dQ8BGV9 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atg4dQ8BGV9 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Atg4dQ8BGV9 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atg4dQ8BGV9 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Atg4dQ8BGV9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atg4dQ8BGV9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atg4dQ8BGV9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Atg4dQ8BGV9 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Atg4dQ8BGV9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Atg4dQ8BGV9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atg4dQ8BGV9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atg4dQ8BGV9 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atg4dQ8BGV9 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atg4dQ8BGV9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Atg4dQ8BGV9 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.28■□□□□ 0.68
Atg4dQ8BGV9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.28■□□□□ 0.68
Atg4dQ8BGV9 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atg4dQ8BGV9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atg4dQ8BGV9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms