Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Usp6nlQ80XC3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Usp6nlQ80XC3 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Usp6nlQ80XC3 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Usp6nlQ80XC3 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC22.96■■□□□ 1.27
Usp6nlQ80XC3 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.96■■□□□ 1.27
Usp6nlQ80XC3 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Usp6nlQ80XC3 Gm12251-201ENSMUST00000117893 792 ntBASIC22.95■■□□□ 1.26
Usp6nlQ80XC3 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Usp6nlQ80XC3 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Usp6nlQ80XC3 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC22.95■■□□□ 1.26
Usp6nlQ80XC3 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Usp6nlQ80XC3 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Usp6nlQ80XC3 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Usp6nlQ80XC3 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
Usp6nlQ80XC3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Usp6nlQ80XC3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Usp6nlQ80XC3 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Usp6nlQ80XC3 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Usp6nlQ80XC3 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC22.94■■□□□ 1.26
Usp6nlQ80XC3 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Usp6nlQ80XC3 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
Usp6nlQ80XC3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Usp6nlQ80XC3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Usp6nlQ80XC3 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Usp6nlQ80XC3 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Usp6nlQ80XC3 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Usp6nlQ80XC3 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
Usp6nlQ80XC3 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Usp6nlQ80XC3 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC22.93■■□□□ 1.26
Usp6nlQ80XC3 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Usp6nlQ80XC3 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Usp6nlQ80XC3 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Usp6nlQ80XC3 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Usp6nlQ80XC3 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC22.92■■□□□ 1.26
Usp6nlQ80XC3 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Usp6nlQ80XC3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Usp6nlQ80XC3 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Usp6nlQ80XC3 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC22.91■■□□□ 1.26
Usp6nlQ80XC3 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC22.91■■□□□ 1.26
Usp6nlQ80XC3 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC22.91■■□□□ 1.26
Usp6nlQ80XC3 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Usp6nlQ80XC3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Usp6nlQ80XC3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC22.91■■□□□ 1.26
Usp6nlQ80XC3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Usp6nlQ80XC3 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Usp6nlQ80XC3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Usp6nlQ80XC3 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC22.9■■□□□ 1.26
Usp6nlQ80XC3 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Usp6nlQ80XC3 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Usp6nlQ80XC3 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Usp6nlQ80XC3 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Usp6nlQ80XC3 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Usp6nlQ80XC3 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Usp6nlQ80XC3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
Usp6nlQ80XC3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Usp6nlQ80XC3 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC22.89■■□□□ 1.26
Usp6nlQ80XC3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Usp6nlQ80XC3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.26
Usp6nlQ80XC3 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Usp6nlQ80XC3 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Usp6nlQ80XC3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC22.89■■□□□ 1.25
Usp6nlQ80XC3 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
Usp6nlQ80XC3 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Usp6nlQ80XC3 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Usp6nlQ80XC3 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Usp6nlQ80XC3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Usp6nlQ80XC3 Il17rd-202ENSMUST00000223942 2186 ntBASIC22.88■■□□□ 1.25
Usp6nlQ80XC3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Usp6nlQ80XC3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Usp6nlQ80XC3 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Usp6nlQ80XC3 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Usp6nlQ80XC3 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Usp6nlQ80XC3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Usp6nlQ80XC3 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Usp6nlQ80XC3 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC22.87■■□□□ 1.25
Usp6nlQ80XC3 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Usp6nlQ80XC3 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Usp6nlQ80XC3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Usp6nlQ80XC3 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Usp6nlQ80XC3 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Usp6nlQ80XC3 Gm5874-201ENSMUST00000096101 508 ntBASIC22.86■■□□□ 1.25
Usp6nlQ80XC3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Usp6nlQ80XC3 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC22.86■■□□□ 1.25
Usp6nlQ80XC3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Usp6nlQ80XC3 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Usp6nlQ80XC3 AC166356.1-201ENSMUST00000228236 1426 ntBASIC22.85■■□□□ 1.25
Usp6nlQ80XC3 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.85■■□□□ 1.25
Usp6nlQ80XC3 Gm43530-201ENSMUST00000195920 274 ntBASIC22.85■■□□□ 1.25
Usp6nlQ80XC3 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Usp6nlQ80XC3 Gm6085-201ENSMUST00000182774 1470 ntBASIC22.85■■□□□ 1.25
Usp6nlQ80XC3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Usp6nlQ80XC3 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Usp6nlQ80XC3 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Usp6nlQ80XC3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Usp6nlQ80XC3 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Usp6nlQ80XC3 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Usp6nlQ80XC3 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Usp6nlQ80XC3 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Usp6nlQ80XC3 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms