Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Rpap1Q80TE0 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC32.69■■■□□ 2.82
Rpap1Q80TE0 Gm26833-201ENSMUST00000180899 440 ntBASIC32.68■■■□□ 2.82
Rpap1Q80TE0 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
Rpap1Q80TE0 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Rpap1Q80TE0 Gm10849-201ENSMUST00000100397 618 ntBASIC32.68■■■□□ 2.82
Rpap1Q80TE0 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
Rpap1Q80TE0 Gm27405-201ENSMUST00000184201 112 ntBASIC32.68■■■□□ 2.82
Rpap1Q80TE0 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
Rpap1Q80TE0 Spcs1-204ENSMUST00000226782 949 ntBASIC32.68■■■□□ 2.82
Rpap1Q80TE0 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC32.68■■■□□ 2.82
Rpap1Q80TE0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC32.67■■■□□ 2.82
Rpap1Q80TE0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC32.67■■■□□ 2.82
Rpap1Q80TE0 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Rpap1Q80TE0 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
Rpap1Q80TE0 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC32.67■■■□□ 2.82
Rpap1Q80TE0 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC32.67■■■□□ 2.82
Rpap1Q80TE0 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC32.67■■■□□ 2.82
Rpap1Q80TE0 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
Rpap1Q80TE0 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC32.67■■■□□ 2.82
Rpap1Q80TE0 Gm10493-201ENSMUST00000097270 612 ntBASIC32.67■■■□□ 2.82
Rpap1Q80TE0 AC115037.1-201ENSMUST00000223391 2173 ntBASIC32.67■■■□□ 2.82
Rpap1Q80TE0 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Rpap1Q80TE0 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Rpap1Q80TE0 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC32.66■■■□□ 2.82
Rpap1Q80TE0 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC32.66■■■□□ 2.82
Rpap1Q80TE0 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC32.66■■■□□ 2.82
Rpap1Q80TE0 Gm43530-201ENSMUST00000195920 274 ntBASIC32.66■■■□□ 2.82
Rpap1Q80TE0 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC32.66■■■□□ 2.82
Rpap1Q80TE0 Spcs1-207ENSMUST00000228767 1008 ntBASIC32.66■■■□□ 2.82
Rpap1Q80TE0 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Rpap1Q80TE0 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
Rpap1Q80TE0 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC32.65■■■□□ 2.82
Rpap1Q80TE0 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Rpap1Q80TE0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC32.65■■■□□ 2.82
Rpap1Q80TE0 Gm42569-201ENSMUST00000200539 472 ntBASIC32.65■■■□□ 2.82
Rpap1Q80TE0 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC32.65■■■□□ 2.82
Rpap1Q80TE0 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Rpap1Q80TE0 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC32.65■■■□□ 2.82
Rpap1Q80TE0 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
Rpap1Q80TE0 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
Rpap1Q80TE0 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
Rpap1Q80TE0 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
Rpap1Q80TE0 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC32.64■■■□□ 2.82
Rpap1Q80TE0 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC32.63■■■□□ 2.81
Rpap1Q80TE0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Rpap1Q80TE0 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC32.63■■■□□ 2.81
Rpap1Q80TE0 Gm7160-202ENSMUST00000188519 1027 ntBASIC32.63■■■□□ 2.81
Rpap1Q80TE0 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Rpap1Q80TE0 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Rpap1Q80TE0 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC32.63■■■□□ 2.81
Rpap1Q80TE0 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC32.62■■■□□ 2.81
Rpap1Q80TE0 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
Rpap1Q80TE0 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC32.62■■■□□ 2.81
Rpap1Q80TE0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC32.62■■■□□ 2.81
Rpap1Q80TE0 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Rpap1Q80TE0 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC32.6■■■□□ 2.81
Rpap1Q80TE0 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Rpap1Q80TE0 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Rpap1Q80TE0 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
Rpap1Q80TE0 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
Rpap1Q80TE0 Gm43060-201ENSMUST00000200621 289 ntBASIC32.6■■■□□ 2.81
Rpap1Q80TE0 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Rpap1Q80TE0 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Rpap1Q80TE0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
Rpap1Q80TE0 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC32.58■■■□□ 2.81
Rpap1Q80TE0 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Rpap1Q80TE0 AC166356.1-201ENSMUST00000228236 1426 ntBASIC32.57■■■□□ 2.81
Rpap1Q80TE0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC32.57■■■□□ 2.81
Rpap1Q80TE0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Rpap1Q80TE0 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Rpap1Q80TE0 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC32.57■■■□□ 2.8
Rpap1Q80TE0 Gm37179-201ENSMUST00000194862 823 ntBASIC32.57■■■□□ 2.8
Rpap1Q80TE0 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC32.57■■■□□ 2.8
Rpap1Q80TE0 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC32.56■■■□□ 2.8
Rpap1Q80TE0 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC32.56■■■□□ 2.8
Rpap1Q80TE0 AC099934.2-201ENSMUST00000196389 70 ntBASIC32.56■■■□□ 2.8
Rpap1Q80TE0 AC156953.1-201ENSMUST00000196953 70 ntBASIC32.56■■■□□ 2.8
Rpap1Q80TE0 AC157822.2-201ENSMUST00000200291 70 ntBASIC32.56■■■□□ 2.8
Rpap1Q80TE0 Gm40848-201ENSMUST00000221998 324 ntBASIC32.56■■■□□ 2.8
Rpap1Q80TE0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC32.56■■■□□ 2.8
Rpap1Q80TE0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC32.56■■■□□ 2.8
Rpap1Q80TE0 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Rpap1Q80TE0 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
Rpap1Q80TE0 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
Rpap1Q80TE0 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Rpap1Q80TE0 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC32.54■■■□□ 2.8
Rpap1Q80TE0 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC32.54■■■□□ 2.8
Rpap1Q80TE0 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Rpap1Q80TE0 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Rpap1Q80TE0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Rpap1Q80TE0 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC32.53■■■□□ 2.8
Rpap1Q80TE0 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC32.53■■■□□ 2.8
Rpap1Q80TE0 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC32.53■■■□□ 2.8
Rpap1Q80TE0 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC32.53■■■□□ 2.8
Rpap1Q80TE0 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Rpap1Q80TE0 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
Rpap1Q80TE0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Rpap1Q80TE0 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC32.52■■■□□ 2.8
Rpap1Q80TE0 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Retrieved 100 of 76,532 protein–RNA pairs in 166.9 ms