Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Prpf38bQ80SY5 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Prpf38bQ80SY5 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Prpf38bQ80SY5 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Prpf38bQ80SY5 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Prpf38bQ80SY5 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Prpf38bQ80SY5 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC21.5■■□□□ 1.03
Prpf38bQ80SY5 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Prpf38bQ80SY5 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Prpf38bQ80SY5 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Prpf38bQ80SY5 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Prpf38bQ80SY5 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Prpf38bQ80SY5 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Prpf38bQ80SY5 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.49■■□□□ 1.03
Prpf38bQ80SY5 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Prpf38bQ80SY5 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
Prpf38bQ80SY5 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Prpf38bQ80SY5 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Prpf38bQ80SY5 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.48■■□□□ 1.03
Prpf38bQ80SY5 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Prpf38bQ80SY5 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Prpf38bQ80SY5 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Prpf38bQ80SY5 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Prpf38bQ80SY5 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Prpf38bQ80SY5 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Prpf38bQ80SY5 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Prpf38bQ80SY5 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Prpf38bQ80SY5 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.47■■□□□ 1.03
Prpf38bQ80SY5 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Prpf38bQ80SY5 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Prpf38bQ80SY5 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
Prpf38bQ80SY5 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Prpf38bQ80SY5 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
Prpf38bQ80SY5 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.47■■□□□ 1.03
Prpf38bQ80SY5 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Prpf38bQ80SY5 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Prpf38bQ80SY5 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Prpf38bQ80SY5 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Prpf38bQ80SY5 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Prpf38bQ80SY5 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Prpf38bQ80SY5 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Prpf38bQ80SY5 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Prpf38bQ80SY5 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Prpf38bQ80SY5 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Prpf38bQ80SY5 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Prpf38bQ80SY5 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Prpf38bQ80SY5 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.45■■□□□ 1.02
Prpf38bQ80SY5 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Prpf38bQ80SY5 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Prpf38bQ80SY5 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Prpf38bQ80SY5 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.45■■□□□ 1.02
Prpf38bQ80SY5 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Prpf38bQ80SY5 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Prpf38bQ80SY5 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.45■■□□□ 1.02
Prpf38bQ80SY5 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Prpf38bQ80SY5 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Prpf38bQ80SY5 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Prpf38bQ80SY5 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Prpf38bQ80SY5 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Prpf38bQ80SY5 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Prpf38bQ80SY5 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.44■■□□□ 1.02
Prpf38bQ80SY5 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Prpf38bQ80SY5 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.44■■□□□ 1.02
Prpf38bQ80SY5 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Prpf38bQ80SY5 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Prpf38bQ80SY5 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Prpf38bQ80SY5 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Prpf38bQ80SY5 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Prpf38bQ80SY5 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Prpf38bQ80SY5 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Prpf38bQ80SY5 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Prpf38bQ80SY5 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Prpf38bQ80SY5 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Prpf38bQ80SY5 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.43■■□□□ 1.02
Prpf38bQ80SY5 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Prpf38bQ80SY5 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Prpf38bQ80SY5 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Prpf38bQ80SY5 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Prpf38bQ80SY5 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Prpf38bQ80SY5 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Prpf38bQ80SY5 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.42■■□□□ 1.02
Prpf38bQ80SY5 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Prpf38bQ80SY5 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Prpf38bQ80SY5 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.42■■□□□ 1.02
Prpf38bQ80SY5 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Prpf38bQ80SY5 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Prpf38bQ80SY5 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Prpf38bQ80SY5 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.41■■□□□ 1.02
Prpf38bQ80SY5 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Prpf38bQ80SY5 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Prpf38bQ80SY5 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Prpf38bQ80SY5 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Prpf38bQ80SY5 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Prpf38bQ80SY5 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Prpf38bQ80SY5 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Prpf38bQ80SY5 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Prpf38bQ80SY5 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.4■■□□□ 1.02
Prpf38bQ80SY5 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Prpf38bQ80SY5 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.4■■□□□ 1.02
Prpf38bQ80SY5 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms