Protein–RNA interactions for Protein: Q6A026

Pds5a, Sister chromatid cohesion protein PDS5 homolog A, mousemouse

Predictions only

Length 1,332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5aQ6A026 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Pds5aQ6A026 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pds5aQ6A026 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Pds5aQ6A026 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Pds5aQ6A026 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pds5aQ6A026 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC22.33■■□□□ 1.17
Pds5aQ6A026 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Pds5aQ6A026 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pds5aQ6A026 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC22.32■■□□□ 1.16
Pds5aQ6A026 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Pds5aQ6A026 Gm6277-202ENSMUST00000224036 2779 ntBASIC22.32■■□□□ 1.16
Pds5aQ6A026 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pds5aQ6A026 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pds5aQ6A026 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pds5aQ6A026 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pds5aQ6A026 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC22.31■■□□□ 1.16
Pds5aQ6A026 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC22.31■■□□□ 1.16
Pds5aQ6A026 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pds5aQ6A026 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pds5aQ6A026 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Pds5aQ6A026 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pds5aQ6A026 Gm5913-201ENSMUST00000119397 1399 ntBASIC22.31■■□□□ 1.16
Pds5aQ6A026 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pds5aQ6A026 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pds5aQ6A026 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pds5aQ6A026 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pds5aQ6A026 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pds5aQ6A026 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC22.3■■□□□ 1.16
Pds5aQ6A026 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Pds5aQ6A026 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Pds5aQ6A026 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC22.3■■□□□ 1.16
Pds5aQ6A026 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Pds5aQ6A026 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
Pds5aQ6A026 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pds5aQ6A026 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pds5aQ6A026 Gm44949-201ENSMUST00000206423 1450 ntBASIC22.29■■□□□ 1.16
Pds5aQ6A026 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pds5aQ6A026 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pds5aQ6A026 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pds5aQ6A026 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pds5aQ6A026 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Pds5aQ6A026 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pds5aQ6A026 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pds5aQ6A026 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pds5aQ6A026 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
Pds5aQ6A026 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pds5aQ6A026 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pds5aQ6A026 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Pds5aQ6A026 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC22.28■■□□□ 1.16
Pds5aQ6A026 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Pds5aQ6A026 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pds5aQ6A026 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC22.27■■□□□ 1.16
Pds5aQ6A026 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Pds5aQ6A026 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC22.27■■□□□ 1.16
Pds5aQ6A026 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pds5aQ6A026 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pds5aQ6A026 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Pds5aQ6A026 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pds5aQ6A026 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pds5aQ6A026 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.26■■□□□ 1.15
Pds5aQ6A026 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Pds5aQ6A026 Gm7143-201ENSMUST00000222811 859 ntBASIC22.26■■□□□ 1.15
Pds5aQ6A026 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
Pds5aQ6A026 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pds5aQ6A026 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Pds5aQ6A026 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pds5aQ6A026 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pds5aQ6A026 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC22.25■■□□□ 1.15
Pds5aQ6A026 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC22.25■■□□□ 1.15
Pds5aQ6A026 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.25■■□□□ 1.15
Pds5aQ6A026 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Pds5aQ6A026 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Pds5aQ6A026 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pds5aQ6A026 Gm9870-201ENSMUST00000063874 645 ntBASIC22.24■■□□□ 1.15
Pds5aQ6A026 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pds5aQ6A026 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pds5aQ6A026 Gm38160-201ENSMUST00000193090 2499 ntBASIC22.23■■□□□ 1.15
Pds5aQ6A026 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pds5aQ6A026 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC22.23■■□□□ 1.15
Pds5aQ6A026 Gm12922-201ENSMUST00000120626 809 ntBASIC22.23■■□□□ 1.15
Pds5aQ6A026 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC22.23■■□□□ 1.15
Pds5aQ6A026 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pds5aQ6A026 Gm12504-201ENSMUST00000120860 2231 ntBASIC22.22■■□□□ 1.15
Pds5aQ6A026 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pds5aQ6A026 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Pds5aQ6A026 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pds5aQ6A026 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pds5aQ6A026 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pds5aQ6A026 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pds5aQ6A026 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pds5aQ6A026 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pds5aQ6A026 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pds5aQ6A026 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Pds5aQ6A026 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pds5aQ6A026 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pds5aQ6A026 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pds5aQ6A026 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC22.21■■□□□ 1.15
Pds5aQ6A026 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pds5aQ6A026 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Pds5aQ6A026 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms