Protein–RNA interactions for Protein: Q62521

Zic3, Zinc finger protein ZIC 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic3Q62521 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zic3Q62521 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zic3Q62521 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zic3Q62521 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zic3Q62521 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.34■□□□□ 0.37
Zic3Q62521 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Zic3Q62521 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Zic3Q62521 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Zic3Q62521 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Zic3Q62521 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Zic3Q62521 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Zic3Q62521 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Zic3Q62521 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Zic3Q62521 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Zic3Q62521 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Zic3Q62521 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Zic3Q62521 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.33■□□□□ 0.36
Zic3Q62521 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.33■□□□□ 0.36
Zic3Q62521 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Zic3Q62521 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Zic3Q62521 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Zic3Q62521 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.33■□□□□ 0.36
Zic3Q62521 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.33■□□□□ 0.36
Zic3Q62521 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Zic3Q62521 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.33■□□□□ 0.36
Zic3Q62521 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Zic3Q62521 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Zic3Q62521 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Zic3Q62521 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.32■□□□□ 0.36
Zic3Q62521 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Zic3Q62521 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.32■□□□□ 0.36
Zic3Q62521 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Zic3Q62521 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Zic3Q62521 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Zic3Q62521 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Zic3Q62521 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Zic3Q62521 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.31■□□□□ 0.36
Zic3Q62521 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Zic3Q62521 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.31■□□□□ 0.36
Zic3Q62521 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Zic3Q62521 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Zic3Q62521 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Zic3Q62521 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Zic3Q62521 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Zic3Q62521 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.3■□□□□ 0.36
Zic3Q62521 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Zic3Q62521 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Zic3Q62521 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Zic3Q62521 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.3■□□□□ 0.36
Zic3Q62521 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Zic3Q62521 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
Zic3Q62521 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Zic3Q62521 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.29■□□□□ 0.36
Zic3Q62521 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Zic3Q62521 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.29■□□□□ 0.36
Zic3Q62521 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Zic3Q62521 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Zic3Q62521 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Zic3Q62521 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zic3Q62521 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zic3Q62521 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zic3Q62521 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Zic3Q62521 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zic3Q62521 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zic3Q62521 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.28■□□□□ 0.36
Zic3Q62521 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zic3Q62521 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zic3Q62521 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Zic3Q62521 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Zic3Q62521 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.27■□□□□ 0.36
Zic3Q62521 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.27■□□□□ 0.36
Zic3Q62521 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.27■□□□□ 0.36
Zic3Q62521 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Zic3Q62521 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Zic3Q62521 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Zic3Q62521 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.26■□□□□ 0.35
Zic3Q62521 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Zic3Q62521 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.26■□□□□ 0.35
Zic3Q62521 Gm9959-201ENSMUST00000068277 390 ntBASIC17.26■□□□□ 0.35
Zic3Q62521 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Zic3Q62521 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Zic3Q62521 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Zic3Q62521 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Zic3Q62521 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Zic3Q62521 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Zic3Q62521 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Zic3Q62521 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Zic3Q62521 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Zic3Q62521 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Zic3Q62521 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Zic3Q62521 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Zic3Q62521 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Zic3Q62521 Etf1-202ENSMUST00000180351 108 ntBASIC17.24■□□□□ 0.35
Zic3Q62521 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Zic3Q62521 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
Zic3Q62521 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Zic3Q62521 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Zic3Q62521 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Zic3Q62521 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Zic3Q62521 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 130 ms