Protein–RNA interactions for Protein: Q62191

Trim21, E3 ubiquitin-protein ligase TRIM21, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim21Q62191 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Trim21Q62191 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
Trim21Q62191 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Trim21Q62191 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.73■■□□□ 1.07
Trim21Q62191 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.73■■□□□ 1.07
Trim21Q62191 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim21Q62191 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim21Q62191 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim21Q62191 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim21Q62191 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim21Q62191 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim21Q62191 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Trim21Q62191 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.72■■□□□ 1.07
Trim21Q62191 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim21Q62191 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim21Q62191 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim21Q62191 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim21Q62191 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim21Q62191 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim21Q62191 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Trim21Q62191 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim21Q62191 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim21Q62191 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim21Q62191 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim21Q62191 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim21Q62191 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
Trim21Q62191 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Trim21Q62191 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Trim21Q62191 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Trim21Q62191 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.71■■□□□ 1.07
Trim21Q62191 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.71■■□□□ 1.07
Trim21Q62191 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim21Q62191 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim21Q62191 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim21Q62191 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim21Q62191 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim21Q62191 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Trim21Q62191 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.7■■□□□ 1.06
Trim21Q62191 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim21Q62191 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim21Q62191 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim21Q62191 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Trim21Q62191 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim21Q62191 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim21Q62191 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim21Q62191 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim21Q62191 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Trim21Q62191 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim21Q62191 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
Trim21Q62191 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Trim21Q62191 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim21Q62191 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim21Q62191 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.68■■□□□ 1.06
Trim21Q62191 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
Trim21Q62191 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.68■■□□□ 1.06
Trim21Q62191 Gm45444-201ENSMUST00000211394 898 ntBASIC21.68■■□□□ 1.06
Trim21Q62191 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim21Q62191 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trim21Q62191 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim21Q62191 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim21Q62191 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim21Q62191 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.68■■□□□ 1.06
Trim21Q62191 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim21Q62191 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim21Q62191 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Trim21Q62191 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim21Q62191 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Trim21Q62191 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim21Q62191 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim21Q62191 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim21Q62191 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim21Q62191 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim21Q62191 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Trim21Q62191 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.66■■□□□ 1.06
Trim21Q62191 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.66■■□□□ 1.06
Trim21Q62191 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Trim21Q62191 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.66■■□□□ 1.06
Trim21Q62191 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim21Q62191 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim21Q62191 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Trim21Q62191 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim21Q62191 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim21Q62191 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim21Q62191 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Trim21Q62191 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim21Q62191 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.65■■□□□ 1.06
Trim21Q62191 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Trim21Q62191 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Trim21Q62191 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Trim21Q62191 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Trim21Q62191 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Trim21Q62191 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Trim21Q62191 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim21Q62191 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Trim21Q62191 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
Trim21Q62191 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.64■■□□□ 1.05
Trim21Q62191 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.64■■□□□ 1.05
Trim21Q62191 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim21Q62191 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim21Q62191 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms