Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Clns1aQ61189 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clns1aQ61189 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Clns1aQ61189 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clns1aQ61189 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clns1aQ61189 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clns1aQ61189 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clns1aQ61189 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Clns1aQ61189 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clns1aQ61189 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Clns1aQ61189 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clns1aQ61189 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clns1aQ61189 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clns1aQ61189 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
Clns1aQ61189 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clns1aQ61189 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clns1aQ61189 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Clns1aQ61189 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clns1aQ61189 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Clns1aQ61189 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Clns1aQ61189 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Clns1aQ61189 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Clns1aQ61189 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Clns1aQ61189 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Clns1aQ61189 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Clns1aQ61189 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Clns1aQ61189 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Clns1aQ61189 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Clns1aQ61189 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Clns1aQ61189 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clns1aQ61189 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clns1aQ61189 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clns1aQ61189 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clns1aQ61189 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clns1aQ61189 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clns1aQ61189 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clns1aQ61189 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Clns1aQ61189 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clns1aQ61189 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Clns1aQ61189 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Clns1aQ61189 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Clns1aQ61189 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Clns1aQ61189 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clns1aQ61189 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clns1aQ61189 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clns1aQ61189 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clns1aQ61189 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clns1aQ61189 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clns1aQ61189 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clns1aQ61189 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clns1aQ61189 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clns1aQ61189 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clns1aQ61189 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clns1aQ61189 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.56■□□□□ 0.4
Clns1aQ61189 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clns1aQ61189 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.56■□□□□ 0.4
Clns1aQ61189 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Clns1aQ61189 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clns1aQ61189 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clns1aQ61189 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Clns1aQ61189 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Clns1aQ61189 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clns1aQ61189 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Clns1aQ61189 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Clns1aQ61189 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clns1aQ61189 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Clns1aQ61189 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Clns1aQ61189 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Clns1aQ61189 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.55■□□□□ 0.4
Clns1aQ61189 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Clns1aQ61189 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.55■□□□□ 0.4
Clns1aQ61189 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Clns1aQ61189 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Clns1aQ61189 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clns1aQ61189 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Clns1aQ61189 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clns1aQ61189 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clns1aQ61189 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clns1aQ61189 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clns1aQ61189 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clns1aQ61189 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clns1aQ61189 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clns1aQ61189 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clns1aQ61189 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clns1aQ61189 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Clns1aQ61189 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clns1aQ61189 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clns1aQ61189 Gm7432-201ENSMUST00000210343 879 ntBASIC17.53■□□□□ 0.4
Clns1aQ61189 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clns1aQ61189 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clns1aQ61189 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.53■□□□□ 0.4
Clns1aQ61189 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.53■□□□□ 0.4
Clns1aQ61189 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clns1aQ61189 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clns1aQ61189 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clns1aQ61189 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clns1aQ61189 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clns1aQ61189 Golph3-202ENSMUST00000226517 2359 ntBASIC17.52■□□□□ 0.4
Clns1aQ61189 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Clns1aQ61189 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms