Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 AC158990.1-201ENSMUST00000221450 2016 ntBASIC22.01■■□□□ 1.11
Shroom1Q5SX79 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Shroom1Q5SX79 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Shroom1Q5SX79 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC22■■□□□ 1.11
Shroom1Q5SX79 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Shroom1Q5SX79 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC22■■□□□ 1.11
Shroom1Q5SX79 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC22■■□□□ 1.11
Shroom1Q5SX79 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Shroom1Q5SX79 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.98■■□□□ 1.11
Shroom1Q5SX79 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Shroom1Q5SX79 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Shroom1Q5SX79 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Shroom1Q5SX79 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Shroom1Q5SX79 Gm45417-201ENSMUST00000209533 758 ntBASIC21.98■■□□□ 1.11
Shroom1Q5SX79 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Shroom1Q5SX79 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Shroom1Q5SX79 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Shroom1Q5SX79 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Shroom1Q5SX79 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
Shroom1Q5SX79 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Shroom1Q5SX79 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Shroom1Q5SX79 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Shroom1Q5SX79 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Shroom1Q5SX79 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.97■■□□□ 1.11
Shroom1Q5SX79 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Shroom1Q5SX79 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Shroom1Q5SX79 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Shroom1Q5SX79 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Shroom1Q5SX79 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
Shroom1Q5SX79 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.96■■□□□ 1.11
Shroom1Q5SX79 Gm9870-201ENSMUST00000063874 645 ntBASIC21.96■■□□□ 1.11
Shroom1Q5SX79 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.95■■□□□ 1.1
Shroom1Q5SX79 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Shroom1Q5SX79 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Shroom1Q5SX79 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Shroom1Q5SX79 Serp2-204ENSMUST00000228055 705 ntBASIC21.95■■□□□ 1.1
Shroom1Q5SX79 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Shroom1Q5SX79 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Shroom1Q5SX79 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Shroom1Q5SX79 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Shroom1Q5SX79 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Shroom1Q5SX79 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Shroom1Q5SX79 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Shroom1Q5SX79 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Shroom1Q5SX79 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.94■■□□□ 1.1
Shroom1Q5SX79 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Shroom1Q5SX79 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Shroom1Q5SX79 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Shroom1Q5SX79 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Shroom1Q5SX79 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Shroom1Q5SX79 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Shroom1Q5SX79 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Shroom1Q5SX79 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Shroom1Q5SX79 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Shroom1Q5SX79 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Shroom1Q5SX79 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Shroom1Q5SX79 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Shroom1Q5SX79 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Shroom1Q5SX79 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Shroom1Q5SX79 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Shroom1Q5SX79 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Shroom1Q5SX79 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
Shroom1Q5SX79 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.92■■□□□ 1.1
Shroom1Q5SX79 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Shroom1Q5SX79 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Shroom1Q5SX79 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Shroom1Q5SX79 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Shroom1Q5SX79 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Shroom1Q5SX79 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Shroom1Q5SX79 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.91■■□□□ 1.1
Shroom1Q5SX79 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Shroom1Q5SX79 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Shroom1Q5SX79 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.9■■□□□ 1.1
Shroom1Q5SX79 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Shroom1Q5SX79 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
Shroom1Q5SX79 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Shroom1Q5SX79 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Shroom1Q5SX79 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.9■■□□□ 1.1
Shroom1Q5SX79 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Shroom1Q5SX79 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Shroom1Q5SX79 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Shroom1Q5SX79 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Shroom1Q5SX79 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Shroom1Q5SX79 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.9■■□□□ 1.1
Shroom1Q5SX79 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Shroom1Q5SX79 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.89■■□□□ 1.1
Shroom1Q5SX79 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.89■■□□□ 1.1
Shroom1Q5SX79 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Shroom1Q5SX79 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.89■■□□□ 1.09
Shroom1Q5SX79 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.89■■□□□ 1.09
Shroom1Q5SX79 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.89■■□□□ 1.09
Shroom1Q5SX79 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Shroom1Q5SX79 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.89■■□□□ 1.09
Shroom1Q5SX79 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Shroom1Q5SX79 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Shroom1Q5SX79 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Shroom1Q5SX79 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.89■■□□□ 1.09
Shroom1Q5SX79 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Shroom1Q5SX79 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
Shroom1Q5SX79 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms