Protein–RNA interactions for Protein: Q45KJ6

Lin28b, Protein lin-28 homolog B, mousemouse

Known RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28bQ45KJ6 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lin28bQ45KJ6 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lin28bQ45KJ6 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lin28bQ45KJ6 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lin28bQ45KJ6 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lin28bQ45KJ6 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.68■□□□□ 0.74
Lin28bQ45KJ6 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.68■□□□□ 0.74
Lin28bQ45KJ6 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lin28bQ45KJ6 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lin28bQ45KJ6 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Lin28bQ45KJ6 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Lin28bQ45KJ6 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
Lin28bQ45KJ6 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Lin28bQ45KJ6 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Lin28bQ45KJ6 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Lin28bQ45KJ6 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Lin28bQ45KJ6 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lin28bQ45KJ6 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Lin28bQ45KJ6 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lin28bQ45KJ6 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lin28bQ45KJ6 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Lin28bQ45KJ6 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lin28bQ45KJ6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Lin28bQ45KJ6 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lin28bQ45KJ6 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Lin28bQ45KJ6 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lin28bQ45KJ6 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lin28bQ45KJ6 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lin28bQ45KJ6 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.66■□□□□ 0.74
Lin28bQ45KJ6 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.66■□□□□ 0.74
Lin28bQ45KJ6 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.66■□□□□ 0.74
Lin28bQ45KJ6 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Lin28bQ45KJ6 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lin28bQ45KJ6 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lin28bQ45KJ6 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lin28bQ45KJ6 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lin28bQ45KJ6 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Lin28bQ45KJ6 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lin28bQ45KJ6 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lin28bQ45KJ6 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lin28bQ45KJ6 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lin28bQ45KJ6 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Lin28bQ45KJ6 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.74
Lin28bQ45KJ6 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Lin28bQ45KJ6 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
Lin28bQ45KJ6 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Lin28bQ45KJ6 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lin28bQ45KJ6 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
Lin28bQ45KJ6 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.63■□□□□ 0.73
Lin28bQ45KJ6 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lin28bQ45KJ6 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.63■□□□□ 0.73
Lin28bQ45KJ6 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Lin28bQ45KJ6 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.63■□□□□ 0.73
Lin28bQ45KJ6 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
Lin28bQ45KJ6 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lin28bQ45KJ6 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lin28bQ45KJ6 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Lin28bQ45KJ6 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lin28bQ45KJ6 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Lin28bQ45KJ6 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.62■□□□□ 0.73
Lin28bQ45KJ6 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.62■□□□□ 0.73
Lin28bQ45KJ6 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lin28bQ45KJ6 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Lin28bQ45KJ6 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Lin28bQ45KJ6 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.62■□□□□ 0.73
Lin28bQ45KJ6 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lin28bQ45KJ6 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lin28bQ45KJ6 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lin28bQ45KJ6 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.61■□□□□ 0.73
Lin28bQ45KJ6 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lin28bQ45KJ6 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lin28bQ45KJ6 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lin28bQ45KJ6 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lin28bQ45KJ6 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Lin28bQ45KJ6 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lin28bQ45KJ6 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.6■□□□□ 0.73
Lin28bQ45KJ6 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Lin28bQ45KJ6 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lin28bQ45KJ6 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lin28bQ45KJ6 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Lin28bQ45KJ6 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lin28bQ45KJ6 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Lin28bQ45KJ6 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Lin28bQ45KJ6 Gm43137-201ENSMUST00000198052 594 ntBASIC19.59■□□□□ 0.73
Lin28bQ45KJ6 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lin28bQ45KJ6 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Lin28bQ45KJ6 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Lin28bQ45KJ6 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lin28bQ45KJ6 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lin28bQ45KJ6 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.58■□□□□ 0.72
Lin28bQ45KJ6 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Lin28bQ45KJ6 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lin28bQ45KJ6 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lin28bQ45KJ6 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.57■□□□□ 0.72
Lin28bQ45KJ6 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Lin28bQ45KJ6 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.57■□□□□ 0.72
Lin28bQ45KJ6 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lin28bQ45KJ6 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.57■□□□□ 0.72
Lin28bQ45KJ6 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lin28bQ45KJ6 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms