Protein–RNA interactions for Protein: Q3UZD5

Prdm6, Putative histone-lysine N-methyltransferase PRDM6, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm6Q3UZD5 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prdm6Q3UZD5 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.32■□□□□ 0.84
Prdm6Q3UZD5 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prdm6Q3UZD5 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Prdm6Q3UZD5 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Prdm6Q3UZD5 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prdm6Q3UZD5 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.31■□□□□ 0.84
Prdm6Q3UZD5 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.31■□□□□ 0.84
Prdm6Q3UZD5 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Prdm6Q3UZD5 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
Prdm6Q3UZD5 Gm4968-201ENSMUST00000071458 858 ntBASIC20.31■□□□□ 0.84
Prdm6Q3UZD5 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Prdm6Q3UZD5 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prdm6Q3UZD5 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prdm6Q3UZD5 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prdm6Q3UZD5 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.3■□□□□ 0.84
Prdm6Q3UZD5 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Prdm6Q3UZD5 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Prdm6Q3UZD5 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prdm6Q3UZD5 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prdm6Q3UZD5 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Prdm6Q3UZD5 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Prdm6Q3UZD5 Gm13836-201ENSMUST00000121159 501 ntBASIC20.29■□□□□ 0.84
Prdm6Q3UZD5 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prdm6Q3UZD5 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Prdm6Q3UZD5 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prdm6Q3UZD5 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prdm6Q3UZD5 Gm12527-201ENSMUST00000117967 564 ntBASIC20.28■□□□□ 0.84
Prdm6Q3UZD5 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Prdm6Q3UZD5 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prdm6Q3UZD5 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Prdm6Q3UZD5 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.28■□□□□ 0.84
Prdm6Q3UZD5 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.28■□□□□ 0.84
Prdm6Q3UZD5 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Prdm6Q3UZD5 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prdm6Q3UZD5 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.27■□□□□ 0.84
Prdm6Q3UZD5 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prdm6Q3UZD5 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
Prdm6Q3UZD5 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.27■□□□□ 0.84
Prdm6Q3UZD5 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Prdm6Q3UZD5 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.27■□□□□ 0.84
Prdm6Q3UZD5 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Prdm6Q3UZD5 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prdm6Q3UZD5 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Prdm6Q3UZD5 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Prdm6Q3UZD5 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prdm6Q3UZD5 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Prdm6Q3UZD5 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Prdm6Q3UZD5 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prdm6Q3UZD5 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.26■□□□□ 0.83
Prdm6Q3UZD5 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.26■□□□□ 0.83
Prdm6Q3UZD5 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prdm6Q3UZD5 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Prdm6Q3UZD5 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prdm6Q3UZD5 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prdm6Q3UZD5 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Prdm6Q3UZD5 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prdm6Q3UZD5 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Prdm6Q3UZD5 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.25■□□□□ 0.83
Prdm6Q3UZD5 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prdm6Q3UZD5 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Prdm6Q3UZD5 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prdm6Q3UZD5 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prdm6Q3UZD5 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prdm6Q3UZD5 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prdm6Q3UZD5 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prdm6Q3UZD5 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prdm6Q3UZD5 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Prdm6Q3UZD5 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.24■□□□□ 0.83
Prdm6Q3UZD5 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prdm6Q3UZD5 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Prdm6Q3UZD5 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prdm6Q3UZD5 Gm13168-201ENSMUST00000121771 632 ntBASIC20.23■□□□□ 0.83
Prdm6Q3UZD5 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.23■□□□□ 0.83
Prdm6Q3UZD5 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prdm6Q3UZD5 Gm10812-201ENSMUST00000099864 546 ntBASIC20.23■□□□□ 0.83
Prdm6Q3UZD5 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prdm6Q3UZD5 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.23■□□□□ 0.83
Prdm6Q3UZD5 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Prdm6Q3UZD5 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prdm6Q3UZD5 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Prdm6Q3UZD5 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Prdm6Q3UZD5 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Prdm6Q3UZD5 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prdm6Q3UZD5 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prdm6Q3UZD5 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prdm6Q3UZD5 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Prdm6Q3UZD5 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Prdm6Q3UZD5 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Prdm6Q3UZD5 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.21■□□□□ 0.83
Prdm6Q3UZD5 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prdm6Q3UZD5 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Prdm6Q3UZD5 Mir5133-201ENSMUST00000174955 77 ntBASIC20.21■□□□□ 0.83
Prdm6Q3UZD5 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prdm6Q3UZD5 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prdm6Q3UZD5 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.21■□□□□ 0.83
Prdm6Q3UZD5 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Prdm6Q3UZD5 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Prdm6Q3UZD5 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.2■□□□□ 0.82
Prdm6Q3UZD5 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms