Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Fam196aQ3USH1 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Fam196aQ3USH1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Fam196aQ3USH1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Fam196aQ3USH1 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Fam196aQ3USH1 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Fam196aQ3USH1 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Fam196aQ3USH1 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Fam196aQ3USH1 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Fam196aQ3USH1 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Fam196aQ3USH1 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Fam196aQ3USH1 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC21.01■□□□□ 0.95
Fam196aQ3USH1 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Fam196aQ3USH1 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.01■□□□□ 0.95
Fam196aQ3USH1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Fam196aQ3USH1 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Fam196aQ3USH1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.01■□□□□ 0.95
Fam196aQ3USH1 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC21■□□□□ 0.95
Fam196aQ3USH1 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Fam196aQ3USH1 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Fam196aQ3USH1 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Fam196aQ3USH1 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21■□□□□ 0.95
Fam196aQ3USH1 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Fam196aQ3USH1 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Fam196aQ3USH1 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Fam196aQ3USH1 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.99■□□□□ 0.95
Fam196aQ3USH1 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.99■□□□□ 0.95
Fam196aQ3USH1 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.99■□□□□ 0.95
Fam196aQ3USH1 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Fam196aQ3USH1 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Fam196aQ3USH1 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Fam196aQ3USH1 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
Fam196aQ3USH1 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Fam196aQ3USH1 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Fam196aQ3USH1 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Fam196aQ3USH1 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Fam196aQ3USH1 Smad6-203ENSMUST00000179458 273 ntBASIC20.98■□□□□ 0.95
Fam196aQ3USH1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.98■□□□□ 0.95
Fam196aQ3USH1 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Fam196aQ3USH1 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Fam196aQ3USH1 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.97■□□□□ 0.95
Fam196aQ3USH1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Fam196aQ3USH1 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Fam196aQ3USH1 Gm12933-201ENSMUST00000120203 872 ntBASIC20.97■□□□□ 0.95
Fam196aQ3USH1 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.97■□□□□ 0.95
Fam196aQ3USH1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Fam196aQ3USH1 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Fam196aQ3USH1 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Fam196aQ3USH1 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Fam196aQ3USH1 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Fam196aQ3USH1 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.96■□□□□ 0.95
Fam196aQ3USH1 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.96■□□□□ 0.95
Fam196aQ3USH1 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Fam196aQ3USH1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Fam196aQ3USH1 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Fam196aQ3USH1 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Fam196aQ3USH1 Nespas-201ENSMUST00000143738 1083 ntBASIC20.95■□□□□ 0.94
Fam196aQ3USH1 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.95■□□□□ 0.94
Fam196aQ3USH1 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Fam196aQ3USH1 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.95■□□□□ 0.94
Fam196aQ3USH1 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Fam196aQ3USH1 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.94■□□□□ 0.94
Fam196aQ3USH1 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Fam196aQ3USH1 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Fam196aQ3USH1 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Fam196aQ3USH1 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.94■□□□□ 0.94
Fam196aQ3USH1 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Fam196aQ3USH1 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Fam196aQ3USH1 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Fam196aQ3USH1 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Fam196aQ3USH1 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Fam196aQ3USH1 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.93■□□□□ 0.94
Fam196aQ3USH1 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Fam196aQ3USH1 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Fam196aQ3USH1 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.93■□□□□ 0.94
Fam196aQ3USH1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Fam196aQ3USH1 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Fam196aQ3USH1 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.92■□□□□ 0.94
Fam196aQ3USH1 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Fam196aQ3USH1 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.92■□□□□ 0.94
Fam196aQ3USH1 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.92■□□□□ 0.94
Fam196aQ3USH1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Fam196aQ3USH1 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Fam196aQ3USH1 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Fam196aQ3USH1 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Fam196aQ3USH1 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Fam196aQ3USH1 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Fam196aQ3USH1 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Fam196aQ3USH1 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Fam196aQ3USH1 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Fam196aQ3USH1 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Fam196aQ3USH1 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Fam196aQ3USH1 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.9■□□□□ 0.94
Fam196aQ3USH1 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.9■□□□□ 0.94
Fam196aQ3USH1 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Fam196aQ3USH1 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.9■□□□□ 0.94
Fam196aQ3USH1 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Fam196aQ3USH1 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
Fam196aQ3USH1 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Fam196aQ3USH1 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms