Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.89■□□□□ 0.93
Thumpd3P97770 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.89■□□□□ 0.93
Thumpd3P97770 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.89■□□□□ 0.93
Thumpd3P97770 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Thumpd3P97770 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Thumpd3P97770 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Thumpd3P97770 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Thumpd3P97770 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Thumpd3P97770 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Thumpd3P97770 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Thumpd3P97770 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Thumpd3P97770 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Thumpd3P97770 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Thumpd3P97770 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.88■□□□□ 0.93
Thumpd3P97770 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.87■□□□□ 0.93
Thumpd3P97770 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Thumpd3P97770 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Thumpd3P97770 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Thumpd3P97770 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Thumpd3P97770 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.87■□□□□ 0.93
Thumpd3P97770 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.87■□□□□ 0.93
Thumpd3P97770 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Thumpd3P97770 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Thumpd3P97770 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Thumpd3P97770 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Thumpd3P97770 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Thumpd3P97770 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Thumpd3P97770 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Thumpd3P97770 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Thumpd3P97770 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.86■□□□□ 0.93
Thumpd3P97770 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Thumpd3P97770 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Thumpd3P97770 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Thumpd3P97770 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.86■□□□□ 0.93
Thumpd3P97770 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Thumpd3P97770 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.85■□□□□ 0.93
Thumpd3P97770 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Thumpd3P97770 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Thumpd3P97770 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Thumpd3P97770 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.85■□□□□ 0.93
Thumpd3P97770 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Thumpd3P97770 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Thumpd3P97770 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Thumpd3P97770 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.85■□□□□ 0.93
Thumpd3P97770 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Thumpd3P97770 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Thumpd3P97770 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Thumpd3P97770 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Thumpd3P97770 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Thumpd3P97770 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Thumpd3P97770 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Thumpd3P97770 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Thumpd3P97770 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Thumpd3P97770 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.83■□□□□ 0.93
Thumpd3P97770 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Thumpd3P97770 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Thumpd3P97770 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Thumpd3P97770 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Thumpd3P97770 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Thumpd3P97770 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Thumpd3P97770 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Thumpd3P97770 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Thumpd3P97770 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Thumpd3P97770 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Thumpd3P97770 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Thumpd3P97770 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.82■□□□□ 0.92
Thumpd3P97770 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Thumpd3P97770 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Thumpd3P97770 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Thumpd3P97770 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Thumpd3P97770 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Thumpd3P97770 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Thumpd3P97770 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Thumpd3P97770 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Thumpd3P97770 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Thumpd3P97770 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Thumpd3P97770 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Thumpd3P97770 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Thumpd3P97770 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Thumpd3P97770 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
Thumpd3P97770 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Thumpd3P97770 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.8■□□□□ 0.92
Thumpd3P97770 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Thumpd3P97770 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.8■□□□□ 0.92
Thumpd3P97770 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Thumpd3P97770 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Thumpd3P97770 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Thumpd3P97770 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.79■□□□□ 0.92
Thumpd3P97770 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Thumpd3P97770 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.79■□□□□ 0.92
Thumpd3P97770 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.79■□□□□ 0.92
Thumpd3P97770 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Thumpd3P97770 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Thumpd3P97770 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Thumpd3P97770 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Thumpd3P97770 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Thumpd3P97770 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Thumpd3P97770 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Thumpd3P97770 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Thumpd3P97770 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms