Protein–RNA interactions for Protein: P97742

Cpt1a, Carnitine O-palmitoyltransferase 1, liver isoform, mousemouse

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpt1aP97742 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cpt1aP97742 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
Cpt1aP97742 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
Cpt1aP97742 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cpt1aP97742 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cpt1aP97742 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cpt1aP97742 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cpt1aP97742 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.17■□□□□ 0.82
Cpt1aP97742 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cpt1aP97742 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Cpt1aP97742 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Cpt1aP97742 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
Cpt1aP97742 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.16■□□□□ 0.82
Cpt1aP97742 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cpt1aP97742 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cpt1aP97742 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cpt1aP97742 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cpt1aP97742 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Cpt1aP97742 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Cpt1aP97742 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.16■□□□□ 0.82
Cpt1aP97742 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cpt1aP97742 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cpt1aP97742 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cpt1aP97742 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cpt1aP97742 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cpt1aP97742 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cpt1aP97742 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cpt1aP97742 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.15■□□□□ 0.82
Cpt1aP97742 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Cpt1aP97742 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cpt1aP97742 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cpt1aP97742 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cpt1aP97742 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cpt1aP97742 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cpt1aP97742 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Cpt1aP97742 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Cpt1aP97742 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cpt1aP97742 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cpt1aP97742 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cpt1aP97742 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cpt1aP97742 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cpt1aP97742 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cpt1aP97742 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cpt1aP97742 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cpt1aP97742 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.11■□□□□ 0.81
Cpt1aP97742 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.11■□□□□ 0.81
Cpt1aP97742 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cpt1aP97742 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cpt1aP97742 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.11■□□□□ 0.81
Cpt1aP97742 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Cpt1aP97742 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cpt1aP97742 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cpt1aP97742 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cpt1aP97742 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cpt1aP97742 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cpt1aP97742 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Cpt1aP97742 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cpt1aP97742 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cpt1aP97742 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cpt1aP97742 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.1■□□□□ 0.81
Cpt1aP97742 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cpt1aP97742 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cpt1aP97742 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cpt1aP97742 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cpt1aP97742 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cpt1aP97742 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cpt1aP97742 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cpt1aP97742 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cpt1aP97742 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cpt1aP97742 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.08■□□□□ 0.81
Cpt1aP97742 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cpt1aP97742 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cpt1aP97742 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cpt1aP97742 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cpt1aP97742 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cpt1aP97742 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cpt1aP97742 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.07■□□□□ 0.8
Cpt1aP97742 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
Cpt1aP97742 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.07■□□□□ 0.8
Cpt1aP97742 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cpt1aP97742 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cpt1aP97742 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cpt1aP97742 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Cpt1aP97742 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.07■□□□□ 0.8
Cpt1aP97742 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cpt1aP97742 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cpt1aP97742 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cpt1aP97742 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cpt1aP97742 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cpt1aP97742 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cpt1aP97742 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Cpt1aP97742 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cpt1aP97742 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Cpt1aP97742 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cpt1aP97742 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cpt1aP97742 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cpt1aP97742 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cpt1aP97742 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.05■□□□□ 0.8
Cpt1aP97742 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cpt1aP97742 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms