Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx3-2P97503 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx3-2P97503 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Nkx3-2P97503 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Nkx3-2P97503 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Nkx3-2P97503 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nkx3-2P97503 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.45■□□□□ 0.7
Nkx3-2P97503 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.45■□□□□ 0.7
Nkx3-2P97503 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nkx3-2P97503 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Nkx3-2P97503 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.45■□□□□ 0.7
Nkx3-2P97503 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Nkx3-2P97503 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nkx3-2P97503 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Nkx3-2P97503 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx3-2P97503 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Nkx3-2P97503 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx3-2P97503 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.44■□□□□ 0.7
Nkx3-2P97503 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.44■□□□□ 0.7
Nkx3-2P97503 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx3-2P97503 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.43■□□□□ 0.7
Nkx3-2P97503 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx3-2P97503 Gm21956-201ENSMUST00000179946 522 ntBASIC19.43■□□□□ 0.7
Nkx3-2P97503 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx3-2P97503 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx3-2P97503 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx3-2P97503 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx3-2P97503 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx3-2P97503 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx3-2P97503 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx3-2P97503 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx3-2P97503 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.42■□□□□ 0.7
Nkx3-2P97503 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx3-2P97503 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.42■□□□□ 0.7
Nkx3-2P97503 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.42■□□□□ 0.7
Nkx3-2P97503 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx3-2P97503 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx3-2P97503 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Nkx3-2P97503 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.42■□□□□ 0.7
Nkx3-2P97503 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx3-2P97503 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx3-2P97503 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx3-2P97503 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Nkx3-2P97503 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Nkx3-2P97503 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx3-2P97503 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx3-2P97503 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Nkx3-2P97503 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx3-2P97503 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx3-2P97503 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.41■□□□□ 0.7
Nkx3-2P97503 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.41■□□□□ 0.7
Nkx3-2P97503 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.41■□□□□ 0.7
Nkx3-2P97503 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Nkx3-2P97503 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx3-2P97503 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx3-2P97503 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx3-2P97503 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx3-2P97503 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx3-2P97503 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Nkx3-2P97503 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx3-2P97503 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx3-2P97503 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Nkx3-2P97503 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.39■□□□□ 0.69
Nkx3-2P97503 Golgb1-201ENSMUST00000023534 498 ntBASIC19.39■□□□□ 0.69
Nkx3-2P97503 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nkx3-2P97503 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.39■□□□□ 0.69
Nkx3-2P97503 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nkx3-2P97503 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nkx3-2P97503 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nkx3-2P97503 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nkx3-2P97503 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Nkx3-2P97503 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.38■□□□□ 0.69
Nkx3-2P97503 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx3-2P97503 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Nkx3-2P97503 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx3-2P97503 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx3-2P97503 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx3-2P97503 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx3-2P97503 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx3-2P97503 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.37■□□□□ 0.69
Nkx3-2P97503 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.37■□□□□ 0.69
Nkx3-2P97503 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx3-2P97503 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Nkx3-2P97503 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx3-2P97503 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx3-2P97503 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx3-2P97503 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nkx3-2P97503 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nkx3-2P97503 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nkx3-2P97503 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nkx3-2P97503 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nkx3-2P97503 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nkx3-2P97503 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nkx3-2P97503 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nkx3-2P97503 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx3-2P97503 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx3-2P97503 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx3-2P97503 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.35■□□□□ 0.69
Nkx3-2P97503 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.35■□□□□ 0.69
Nkx3-2P97503 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms