Protein–RNA interactions for Protein: P51676

Ccr1l1, C-C chemokine receptor 1-like protein 1, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr1l1P51676 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ccr1l1P51676 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccr1l1P51676 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Ccr1l1P51676 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccr1l1P51676 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccr1l1P51676 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccr1l1P51676 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ccr1l1P51676 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccr1l1P51676 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccr1l1P51676 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ccr1l1P51676 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccr1l1P51676 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.68■□□□□ 0.58
Ccr1l1P51676 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.68■□□□□ 0.58
Ccr1l1P51676 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Ccr1l1P51676 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccr1l1P51676 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Ccr1l1P51676 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.67■□□□□ 0.58
Ccr1l1P51676 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccr1l1P51676 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ccr1l1P51676 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.67■□□□□ 0.58
Ccr1l1P51676 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccr1l1P51676 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccr1l1P51676 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccr1l1P51676 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccr1l1P51676 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Ccr1l1P51676 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ccr1l1P51676 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.67■□□□□ 0.58
Ccr1l1P51676 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccr1l1P51676 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.66■□□□□ 0.58
Ccr1l1P51676 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccr1l1P51676 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccr1l1P51676 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccr1l1P51676 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Ccr1l1P51676 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.66■□□□□ 0.58
Ccr1l1P51676 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.66■□□□□ 0.58
Ccr1l1P51676 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.66■□□□□ 0.58
Ccr1l1P51676 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccr1l1P51676 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccr1l1P51676 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccr1l1P51676 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccr1l1P51676 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.66■□□□□ 0.58
Ccr1l1P51676 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccr1l1P51676 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccr1l1P51676 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccr1l1P51676 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccr1l1P51676 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccr1l1P51676 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.65■□□□□ 0.58
Ccr1l1P51676 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccr1l1P51676 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.65■□□□□ 0.58
Ccr1l1P51676 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ccr1l1P51676 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccr1l1P51676 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ccr1l1P51676 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccr1l1P51676 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccr1l1P51676 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ccr1l1P51676 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccr1l1P51676 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ccr1l1P51676 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.64■□□□□ 0.57
Ccr1l1P51676 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccr1l1P51676 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccr1l1P51676 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccr1l1P51676 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Ccr1l1P51676 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccr1l1P51676 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccr1l1P51676 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.62■□□□□ 0.57
Ccr1l1P51676 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccr1l1P51676 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ccr1l1P51676 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccr1l1P51676 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccr1l1P51676 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccr1l1P51676 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccr1l1P51676 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccr1l1P51676 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Ccr1l1P51676 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.61■□□□□ 0.57
Ccr1l1P51676 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccr1l1P51676 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccr1l1P51676 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Ccr1l1P51676 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccr1l1P51676 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccr1l1P51676 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.61■□□□□ 0.57
Ccr1l1P51676 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccr1l1P51676 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccr1l1P51676 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccr1l1P51676 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccr1l1P51676 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccr1l1P51676 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ccr1l1P51676 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccr1l1P51676 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.6■□□□□ 0.57
Ccr1l1P51676 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccr1l1P51676 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccr1l1P51676 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ccr1l1P51676 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ccr1l1P51676 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccr1l1P51676 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccr1l1P51676 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccr1l1P51676 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccr1l1P51676 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.59■□□□□ 0.57
Ccr1l1P51676 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccr1l1P51676 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ccr1l1P51676 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms