Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd27P41272 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd27P41272 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cd27P41272 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.62■□□□□ 0.25
Cd27P41272 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.62■□□□□ 0.25
Cd27P41272 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cd27P41272 Gm7417-201ENSMUST00000192950 473 ntBASIC16.62■□□□□ 0.25
Cd27P41272 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.62■□□□□ 0.25
Cd27P41272 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Cd27P41272 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cd27P41272 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cd27P41272 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Cd27P41272 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cd27P41272 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cd27P41272 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cd27P41272 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.61■□□□□ 0.25
Cd27P41272 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cd27P41272 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cd27P41272 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.61■□□□□ 0.25
Cd27P41272 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cd27P41272 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Cd27P41272 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cd27P41272 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cd27P41272 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cd27P41272 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cd27P41272 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cd27P41272 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cd27P41272 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cd27P41272 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cd27P41272 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cd27P41272 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.59■□□□□ 0.25
Cd27P41272 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.59■□□□□ 0.25
Cd27P41272 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cd27P41272 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cd27P41272 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
Cd27P41272 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Cd27P41272 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Cd27P41272 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cd27P41272 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.58■□□□□ 0.24
Cd27P41272 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cd27P41272 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cd27P41272 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cd27P41272 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cd27P41272 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.58■□□□□ 0.24
Cd27P41272 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cd27P41272 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cd27P41272 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cd27P41272 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Cd27P41272 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cd27P41272 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cd27P41272 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cd27P41272 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cd27P41272 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cd27P41272 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cd27P41272 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cd27P41272 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cd27P41272 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cd27P41272 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.56■□□□□ 0.24
Cd27P41272 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Cd27P41272 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cd27P41272 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cd27P41272 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cd27P41272 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Cd27P41272 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cd27P41272 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cd27P41272 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cd27P41272 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cd27P41272 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cd27P41272 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.55■□□□□ 0.24
Cd27P41272 Gm22238-201ENSMUST00000175222 88 ntBASIC16.55■□□□□ 0.24
Cd27P41272 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Cd27P41272 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cd27P41272 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cd27P41272 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cd27P41272 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.54■□□□□ 0.24
Cd27P41272 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cd27P41272 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cd27P41272 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cd27P41272 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cd27P41272 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cd27P41272 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC16.54■□□□□ 0.24
Cd27P41272 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Cd27P41272 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cd27P41272 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cd27P41272 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cd27P41272 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cd27P41272 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cd27P41272 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.53■□□□□ 0.24
Cd27P41272 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cd27P41272 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cd27P41272 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Cd27P41272 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.53■□□□□ 0.24
Cd27P41272 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC16.53■□□□□ 0.24
Cd27P41272 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cd27P41272 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cd27P41272 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Cd27P41272 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cd27P41272 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cd27P41272 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cd27P41272 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms