Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mmp9P41245 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mmp9P41245 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mmp9P41245 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.19■□□□□ 0.34
Mmp9P41245 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Mmp9P41245 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.19■□□□□ 0.34
Mmp9P41245 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mmp9P41245 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp9P41245 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp9P41245 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp9P41245 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.18■□□□□ 0.34
Mmp9P41245 Gm12366-201ENSMUST00000121722 873 ntBASIC17.18■□□□□ 0.34
Mmp9P41245 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.18■□□□□ 0.34
Mmp9P41245 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp9P41245 Gm9806-201ENSMUST00000051080 552 ntBASIC17.18■□□□□ 0.34
Mmp9P41245 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.18■□□□□ 0.34
Mmp9P41245 Gm5786-201ENSMUST00000085368 882 ntBASIC17.18■□□□□ 0.34
Mmp9P41245 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp9P41245 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Mmp9P41245 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp9P41245 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp9P41245 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp9P41245 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Mmp9P41245 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp9P41245 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp9P41245 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Mmp9P41245 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Mmp9P41245 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC17.17■□□□□ 0.34
Mmp9P41245 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp9P41245 Gm45364-201ENSMUST00000210883 159 ntBASIC17.17■□□□□ 0.34
Mmp9P41245 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Mmp9P41245 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Mmp9P41245 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp9P41245 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp9P41245 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.16■□□□□ 0.34
Mmp9P41245 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Mmp9P41245 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp9P41245 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp9P41245 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp9P41245 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp9P41245 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.16■□□□□ 0.34
Mmp9P41245 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp9P41245 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp9P41245 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp9P41245 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Mmp9P41245 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp9P41245 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.16■□□□□ 0.34
Mmp9P41245 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp9P41245 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp9P41245 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp9P41245 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.15■□□□□ 0.34
Mmp9P41245 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp9P41245 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp9P41245 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp9P41245 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Mmp9P41245 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp9P41245 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.15■□□□□ 0.34
Mmp9P41245 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.15■□□□□ 0.34
Mmp9P41245 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp9P41245 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp9P41245 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp9P41245 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp9P41245 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.14■□□□□ 0.33
Mmp9P41245 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp9P41245 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp9P41245 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Mmp9P41245 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Mmp9P41245 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp9P41245 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp9P41245 Gm16437-201ENSMUST00000025669 507 ntBASIC17.14■□□□□ 0.33
Mmp9P41245 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp9P41245 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp9P41245 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp9P41245 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Mmp9P41245 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp9P41245 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Mmp9P41245 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp9P41245 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp9P41245 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.13■□□□□ 0.33
Mmp9P41245 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp9P41245 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp9P41245 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp9P41245 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.13■□□□□ 0.33
Mmp9P41245 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp9P41245 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Mmp9P41245 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp9P41245 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp9P41245 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.12■□□□□ 0.33
Mmp9P41245 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp9P41245 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Mmp9P41245 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp9P41245 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp9P41245 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp9P41245 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp9P41245 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp9P41245 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp9P41245 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.12■□□□□ 0.33
Mmp9P41245 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.12■□□□□ 0.33
Mmp9P41245 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Mmp9P41245 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 107.9 ms