Protein–RNA interactions for Protein: O88623

Usp2, Ubiquitin carboxyl-terminal hydrolase 2, mousemouse

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp2O88623 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Usp2O88623 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Usp2O88623 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Usp2O88623 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Usp2O88623 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Usp2O88623 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Usp2O88623 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Usp2O88623 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Usp2O88623 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.13■□□□□ 0.97
Usp2O88623 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.13■□□□□ 0.97
Usp2O88623 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Usp2O88623 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Usp2O88623 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Usp2O88623 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.13■□□□□ 0.97
Usp2O88623 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Usp2O88623 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.12■□□□□ 0.97
Usp2O88623 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Usp2O88623 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Usp2O88623 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Usp2O88623 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Usp2O88623 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp2O88623 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Usp2O88623 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp2O88623 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Usp2O88623 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp2O88623 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp2O88623 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp2O88623 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp2O88623 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.1■□□□□ 0.97
Usp2O88623 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp2O88623 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp2O88623 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.09■□□□□ 0.97
Usp2O88623 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp2O88623 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp2O88623 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Usp2O88623 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Usp2O88623 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp2O88623 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Usp2O88623 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Usp2O88623 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp2O88623 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.09■□□□□ 0.97
Usp2O88623 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Usp2O88623 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Usp2O88623 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.09■□□□□ 0.97
Usp2O88623 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Usp2O88623 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp2O88623 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Usp2O88623 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.08■□□□□ 0.97
Usp2O88623 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usp2O88623 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Usp2O88623 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usp2O88623 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Usp2O88623 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.08■□□□□ 0.97
Usp2O88623 Gm7143-201ENSMUST00000222811 859 ntBASIC21.08■□□□□ 0.97
Usp2O88623 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usp2O88623 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usp2O88623 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usp2O88623 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
Usp2O88623 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usp2O88623 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.08■□□□□ 0.96
Usp2O88623 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Usp2O88623 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Usp2O88623 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp2O88623 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
Usp2O88623 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.07■□□□□ 0.96
Usp2O88623 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp2O88623 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
Usp2O88623 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp2O88623 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Usp2O88623 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Usp2O88623 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Usp2O88623 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.06■□□□□ 0.96
Usp2O88623 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Usp2O88623 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp2O88623 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Usp2O88623 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp2O88623 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.05■□□□□ 0.96
Usp2O88623 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Usp2O88623 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.05■□□□□ 0.96
Usp2O88623 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.05■□□□□ 0.96
Usp2O88623 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Usp2O88623 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.05■□□□□ 0.96
Usp2O88623 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp2O88623 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp2O88623 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp2O88623 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp2O88623 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Usp2O88623 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp2O88623 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
Usp2O88623 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp2O88623 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp2O88623 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp2O88623 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp2O88623 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp2O88623 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.02■□□□□ 0.96
Usp2O88623 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp2O88623 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp2O88623 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.02■□□□□ 0.96
Usp2O88623 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Usp2O88623 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms