Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn1O88551 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.65■□□□□ 0.42
Cldn1O88551 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn1O88551 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn1O88551 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Cldn1O88551 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Cldn1O88551 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.64■□□□□ 0.41
Cldn1O88551 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.64■□□□□ 0.41
Cldn1O88551 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn1O88551 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn1O88551 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn1O88551 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn1O88551 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.63■□□□□ 0.41
Cldn1O88551 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.63■□□□□ 0.41
Cldn1O88551 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Cldn1O88551 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn1O88551 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Cldn1O88551 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn1O88551 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn1O88551 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.62■□□□□ 0.41
Cldn1O88551 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn1O88551 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn1O88551 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Cldn1O88551 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn1O88551 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.62■□□□□ 0.41
Cldn1O88551 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn1O88551 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn1O88551 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn1O88551 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn1O88551 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn1O88551 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn1O88551 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Cldn1O88551 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn1O88551 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Cldn1O88551 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn1O88551 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn1O88551 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn1O88551 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn1O88551 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Cldn1O88551 Gm8493-201ENSMUST00000196881 489 ntBASIC17.61■□□□□ 0.41
Cldn1O88551 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn1O88551 Gm9870-201ENSMUST00000063874 645 ntBASIC17.61■□□□□ 0.41
Cldn1O88551 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn1O88551 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Cldn1O88551 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn1O88551 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn1O88551 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Cldn1O88551 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Cldn1O88551 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn1O88551 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Cldn1O88551 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn1O88551 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn1O88551 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn1O88551 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn1O88551 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn1O88551 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn1O88551 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn1O88551 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.59■□□□□ 0.41
Cldn1O88551 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn1O88551 Gm7291-201ENSMUST00000199147 382 ntBASIC17.59■□□□□ 0.41
Cldn1O88551 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn1O88551 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn1O88551 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn1O88551 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn1O88551 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cldn1O88551 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cldn1O88551 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cldn1O88551 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.58■□□□□ 0.4
Cldn1O88551 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cldn1O88551 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cldn1O88551 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cldn1O88551 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn1O88551 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn1O88551 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn1O88551 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cldn1O88551 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn1O88551 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.57■□□□□ 0.4
Cldn1O88551 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Cldn1O88551 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Cldn1O88551 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.56■□□□□ 0.4
Cldn1O88551 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Cldn1O88551 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.56■□□□□ 0.4
Cldn1O88551 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn1O88551 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn1O88551 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn1O88551 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn1O88551 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn1O88551 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn1O88551 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn1O88551 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Cldn1O88551 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.55■□□□□ 0.4
Cldn1O88551 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn1O88551 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn1O88551 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn1O88551 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn1O88551 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn1O88551 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.54■□□□□ 0.4
Cldn1O88551 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn1O88551 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn1O88551 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms