Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ttc3O88196 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC22■■□□□ 1.11
Ttc3O88196 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ttc3O88196 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.99■■□□□ 1.11
Ttc3O88196 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Ttc3O88196 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ttc3O88196 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ttc3O88196 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Ttc3O88196 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ttc3O88196 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ttc3O88196 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.98■■□□□ 1.11
Ttc3O88196 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.98■■□□□ 1.11
Ttc3O88196 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ttc3O88196 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ttc3O88196 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.97■■□□□ 1.11
Ttc3O88196 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ttc3O88196 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.97■■□□□ 1.11
Ttc3O88196 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ttc3O88196 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ttc3O88196 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Ttc3O88196 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ttc3O88196 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ttc3O88196 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ttc3O88196 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.96■■□□□ 1.11
Ttc3O88196 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ttc3O88196 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.96■■□□□ 1.11
Ttc3O88196 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.96■■□□□ 1.11
Ttc3O88196 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.96■■□□□ 1.11
Ttc3O88196 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
Ttc3O88196 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Ttc3O88196 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ttc3O88196 Gm12251-201ENSMUST00000117893 792 ntBASIC21.95■■□□□ 1.1
Ttc3O88196 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ttc3O88196 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ttc3O88196 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.94■■□□□ 1.1
Ttc3O88196 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ttc3O88196 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Ttc3O88196 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ttc3O88196 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ttc3O88196 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ttc3O88196 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Ttc3O88196 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ttc3O88196 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Ttc3O88196 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.93■■□□□ 1.1
Ttc3O88196 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ttc3O88196 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ttc3O88196 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.93■■□□□ 1.1
Ttc3O88196 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ttc3O88196 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ttc3O88196 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ttc3O88196 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Ttc3O88196 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ttc3O88196 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ttc3O88196 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ttc3O88196 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ttc3O88196 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ttc3O88196 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ttc3O88196 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ttc3O88196 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ttc3O88196 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Ttc3O88196 Gm6139-201ENSMUST00000079261 882 ntBASIC21.9■■□□□ 1.1
Ttc3O88196 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ttc3O88196 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ttc3O88196 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ttc3O88196 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Ttc3O88196 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.89■■□□□ 1.1
Ttc3O88196 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ttc3O88196 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ttc3O88196 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.89■■□□□ 1.09
Ttc3O88196 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Ttc3O88196 Gm43530-201ENSMUST00000195920 274 ntBASIC21.89■■□□□ 1.09
Ttc3O88196 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ttc3O88196 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ttc3O88196 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ttc3O88196 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.88■■□□□ 1.09
Ttc3O88196 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ttc3O88196 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ttc3O88196 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ttc3O88196 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ttc3O88196 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.88■■□□□ 1.09
Ttc3O88196 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ttc3O88196 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ttc3O88196 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.87■■□□□ 1.09
Ttc3O88196 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ttc3O88196 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ttc3O88196 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ttc3O88196 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ttc3O88196 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ttc3O88196 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Ttc3O88196 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ttc3O88196 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ttc3O88196 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ttc3O88196 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ttc3O88196 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ttc3O88196 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ttc3O88196 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ttc3O88196 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ttc3O88196 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.85■■□□□ 1.09
Ttc3O88196 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ttc3O88196 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms