Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Shisa8J3QNX5 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shisa8J3QNX5 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shisa8J3QNX5 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Shisa8J3QNX5 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shisa8J3QNX5 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shisa8J3QNX5 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shisa8J3QNX5 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.82■□□□□ 0.6
Shisa8J3QNX5 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shisa8J3QNX5 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shisa8J3QNX5 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Shisa8J3QNX5 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shisa8J3QNX5 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shisa8J3QNX5 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shisa8J3QNX5 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.82■□□□□ 0.6
Shisa8J3QNX5 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Shisa8J3QNX5 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Shisa8J3QNX5 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shisa8J3QNX5 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shisa8J3QNX5 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shisa8J3QNX5 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shisa8J3QNX5 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shisa8J3QNX5 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shisa8J3QNX5 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shisa8J3QNX5 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shisa8J3QNX5 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Shisa8J3QNX5 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.8■□□□□ 0.6
Shisa8J3QNX5 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shisa8J3QNX5 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shisa8J3QNX5 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Shisa8J3QNX5 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shisa8J3QNX5 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Shisa8J3QNX5 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Shisa8J3QNX5 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shisa8J3QNX5 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shisa8J3QNX5 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.79■□□□□ 0.6
Shisa8J3QNX5 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shisa8J3QNX5 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.79■□□□□ 0.6
Shisa8J3QNX5 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Shisa8J3QNX5 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Shisa8J3QNX5 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Shisa8J3QNX5 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shisa8J3QNX5 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Shisa8J3QNX5 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shisa8J3QNX5 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Shisa8J3QNX5 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.78■□□□□ 0.6
Shisa8J3QNX5 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Shisa8J3QNX5 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.78■□□□□ 0.6
Shisa8J3QNX5 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shisa8J3QNX5 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shisa8J3QNX5 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shisa8J3QNX5 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shisa8J3QNX5 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Shisa8J3QNX5 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.77■□□□□ 0.6
Shisa8J3QNX5 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shisa8J3QNX5 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shisa8J3QNX5 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Shisa8J3QNX5 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.77■□□□□ 0.59
Shisa8J3QNX5 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Shisa8J3QNX5 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Shisa8J3QNX5 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shisa8J3QNX5 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Shisa8J3QNX5 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.76■□□□□ 0.59
Shisa8J3QNX5 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shisa8J3QNX5 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shisa8J3QNX5 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shisa8J3QNX5 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shisa8J3QNX5 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shisa8J3QNX5 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shisa8J3QNX5 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shisa8J3QNX5 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shisa8J3QNX5 Gm11687-201ENSMUST00000118911 886 ntBASIC18.75■□□□□ 0.59
Shisa8J3QNX5 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.75■□□□□ 0.59
Shisa8J3QNX5 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Shisa8J3QNX5 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Shisa8J3QNX5 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shisa8J3QNX5 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shisa8J3QNX5 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shisa8J3QNX5 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Shisa8J3QNX5 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Shisa8J3QNX5 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Shisa8J3QNX5 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shisa8J3QNX5 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.74■□□□□ 0.59
Shisa8J3QNX5 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shisa8J3QNX5 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Shisa8J3QNX5 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shisa8J3QNX5 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.73■□□□□ 0.59
Shisa8J3QNX5 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.73■□□□□ 0.59
Shisa8J3QNX5 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.73■□□□□ 0.59
Shisa8J3QNX5 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shisa8J3QNX5 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shisa8J3QNX5 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shisa8J3QNX5 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shisa8J3QNX5 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Shisa8J3QNX5 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shisa8J3QNX5 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Shisa8J3QNX5 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shisa8J3QNX5 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shisa8J3QNX5 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Shisa8J3QNX5 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms