Protein–RNA interactions for Protein: J3QMK1

Sgo2b, Shugoshin 2B, mousemouse

Predictions only

Length 1,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgo2bJ3QMK1 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Sgo2bJ3QMK1 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sgo2bJ3QMK1 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sgo2bJ3QMK1 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sgo2bJ3QMK1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sgo2bJ3QMK1 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Sgo2bJ3QMK1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sgo2bJ3QMK1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sgo2bJ3QMK1 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sgo2bJ3QMK1 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sgo2bJ3QMK1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Sgo2bJ3QMK1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sgo2bJ3QMK1 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sgo2bJ3QMK1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sgo2bJ3QMK1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sgo2bJ3QMK1 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sgo2bJ3QMK1 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sgo2bJ3QMK1 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Sgo2bJ3QMK1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sgo2bJ3QMK1 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sgo2bJ3QMK1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Sgo2bJ3QMK1 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sgo2bJ3QMK1 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sgo2bJ3QMK1 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sgo2bJ3QMK1 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sgo2bJ3QMK1 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sgo2bJ3QMK1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sgo2bJ3QMK1 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sgo2bJ3QMK1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sgo2bJ3QMK1 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sgo2bJ3QMK1 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sgo2bJ3QMK1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sgo2bJ3QMK1 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.58■□□□□ 0.89
Sgo2bJ3QMK1 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.58■□□□□ 0.89
Sgo2bJ3QMK1 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.58■□□□□ 0.89
Sgo2bJ3QMK1 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Sgo2bJ3QMK1 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sgo2bJ3QMK1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Sgo2bJ3QMK1 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sgo2bJ3QMK1 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sgo2bJ3QMK1 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sgo2bJ3QMK1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sgo2bJ3QMK1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sgo2bJ3QMK1 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Sgo2bJ3QMK1 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.57■□□□□ 0.88
Sgo2bJ3QMK1 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sgo2bJ3QMK1 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.56■□□□□ 0.88
Sgo2bJ3QMK1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sgo2bJ3QMK1 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.56■□□□□ 0.88
Sgo2bJ3QMK1 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sgo2bJ3QMK1 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sgo2bJ3QMK1 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.56■□□□□ 0.88
Sgo2bJ3QMK1 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.56■□□□□ 0.88
Sgo2bJ3QMK1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sgo2bJ3QMK1 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Sgo2bJ3QMK1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sgo2bJ3QMK1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sgo2bJ3QMK1 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sgo2bJ3QMK1 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.55■□□□□ 0.88
Sgo2bJ3QMK1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Sgo2bJ3QMK1 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sgo2bJ3QMK1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sgo2bJ3QMK1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.55■□□□□ 0.88
Sgo2bJ3QMK1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sgo2bJ3QMK1 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sgo2bJ3QMK1 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sgo2bJ3QMK1 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Sgo2bJ3QMK1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.54■□□□□ 0.88
Sgo2bJ3QMK1 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sgo2bJ3QMK1 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sgo2bJ3QMK1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sgo2bJ3QMK1 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sgo2bJ3QMK1 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sgo2bJ3QMK1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sgo2bJ3QMK1 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Sgo2bJ3QMK1 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sgo2bJ3QMK1 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sgo2bJ3QMK1 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sgo2bJ3QMK1 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sgo2bJ3QMK1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.52■□□□□ 0.88
Sgo2bJ3QMK1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sgo2bJ3QMK1 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sgo2bJ3QMK1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.52■□□□□ 0.88
Sgo2bJ3QMK1 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sgo2bJ3QMK1 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sgo2bJ3QMK1 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Sgo2bJ3QMK1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sgo2bJ3QMK1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sgo2bJ3QMK1 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sgo2bJ3QMK1 Gm10232-201ENSMUST00000089221 720 ntBASIC20.51■□□□□ 0.87
Sgo2bJ3QMK1 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sgo2bJ3QMK1 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Sgo2bJ3QMK1 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Sgo2bJ3QMK1 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.5■□□□□ 0.87
Sgo2bJ3QMK1 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
Sgo2bJ3QMK1 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sgo2bJ3QMK1 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sgo2bJ3QMK1 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sgo2bJ3QMK1 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sgo2bJ3QMK1 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms