Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC17.52■□□□□ 0.4
Gm3727J3QM54 Mir3960-201ENSMUST00000198213 73 ntBASIC17.52■□□□□ 0.4
Gm3727J3QM54 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Gm3727J3QM54 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Gm3727J3QM54 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm3727J3QM54 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm3727J3QM54 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Gm3727J3QM54 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Gm3727J3QM54 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm3727J3QM54 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm3727J3QM54 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm3727J3QM54 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Gm3727J3QM54 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm3727J3QM54 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Gm3727J3QM54 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Gm3727J3QM54 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3727J3QM54 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.5■□□□□ 0.39
Gm3727J3QM54 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3727J3QM54 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Gm3727J3QM54 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3727J3QM54 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3727J3QM54 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3727J3QM54 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Gm3727J3QM54 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.5■□□□□ 0.39
Gm3727J3QM54 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3727J3QM54 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3727J3QM54 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.5■□□□□ 0.39
Gm3727J3QM54 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Gm3727J3QM54 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3727J3QM54 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3727J3QM54 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.49■□□□□ 0.39
Gm3727J3QM54 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3727J3QM54 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Gm3727J3QM54 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3727J3QM54 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Gm3727J3QM54 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3727J3QM54 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3727J3QM54 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3727J3QM54 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3727J3QM54 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Gm3727J3QM54 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Gm3727J3QM54 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Gm3727J3QM54 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3727J3QM54 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3727J3QM54 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3727J3QM54 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3727J3QM54 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Gm3727J3QM54 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3727J3QM54 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.48■□□□□ 0.39
Gm3727J3QM54 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3727J3QM54 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3727J3QM54 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Gm3727J3QM54 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3727J3QM54 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3727J3QM54 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm3727J3QM54 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm3727J3QM54 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm3727J3QM54 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gm3727J3QM54 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gm3727J3QM54 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gm3727J3QM54 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm3727J3QM54 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.47■□□□□ 0.39
Gm3727J3QM54 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Gm3727J3QM54 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm3727J3QM54 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm3727J3QM54 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm3727J3QM54 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.47■□□□□ 0.39
Gm3727J3QM54 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm3727J3QM54 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm3727J3QM54 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm3727J3QM54 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm3727J3QM54 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm3727J3QM54 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm3727J3QM54 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm3727J3QM54 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.46■□□□□ 0.39
Gm3727J3QM54 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm3727J3QM54 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm3727J3QM54 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.46■□□□□ 0.39
Gm3727J3QM54 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm3727J3QM54 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm3727J3QM54 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Gm3727J3QM54 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm3727J3QM54 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm3727J3QM54 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Gm3727J3QM54 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm3727J3QM54 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm3727J3QM54 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Gm3727J3QM54 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm3727J3QM54 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Gm3727J3QM54 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.45■□□□□ 0.38
Gm3727J3QM54 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm3727J3QM54 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Gm3727J3QM54 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Gm3727J3QM54 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm3727J3QM54 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm3727J3QM54 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm3727J3QM54 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm3727J3QM54 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.44■□□□□ 0.38
Gm3727J3QM54 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.44■□□□□ 0.38
Gm3727J3QM54 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 139.7 ms