Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Gm2011-201ENSMUST00000203124 1263 ntBASIC25.13■■□□□ 1.61
Ube4aE9Q735 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ube4aE9Q735 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ube4aE9Q735 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Ube4aE9Q735 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
Ube4aE9Q735 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ube4aE9Q735 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC25.12■■□□□ 1.61
Ube4aE9Q735 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC25.12■■□□□ 1.61
Ube4aE9Q735 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Ube4aE9Q735 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC25.11■■□□□ 1.61
Ube4aE9Q735 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ube4aE9Q735 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC25.11■■□□□ 1.61
Ube4aE9Q735 Gm5576-201ENSMUST00000075809 1236 ntBASIC25.11■■□□□ 1.61
Ube4aE9Q735 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Ube4aE9Q735 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
Ube4aE9Q735 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Ube4aE9Q735 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Ube4aE9Q735 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Ube4aE9Q735 Gm43530-201ENSMUST00000195920 274 ntBASIC25.1■■□□□ 1.61
Ube4aE9Q735 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Ube4aE9Q735 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ube4aE9Q735 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
Ube4aE9Q735 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Ube4aE9Q735 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ube4aE9Q735 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ube4aE9Q735 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Ube4aE9Q735 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
Ube4aE9Q735 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Ube4aE9Q735 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ube4aE9Q735 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ube4aE9Q735 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ube4aE9Q735 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ube4aE9Q735 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Ube4aE9Q735 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Ube4aE9Q735 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC25.08■■□□□ 1.61
Ube4aE9Q735 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC25.08■■□□□ 1.61
Ube4aE9Q735 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC25.08■■□□□ 1.61
Ube4aE9Q735 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Ube4aE9Q735 AC166356.1-201ENSMUST00000228236 1426 ntBASIC25.08■■□□□ 1.61
Ube4aE9Q735 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Ube4aE9Q735 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC25.08■■□□□ 1.61
Ube4aE9Q735 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Ube4aE9Q735 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Ube4aE9Q735 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC25.08■■□□□ 1.6
Ube4aE9Q735 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC25.08■■□□□ 1.6
Ube4aE9Q735 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC25.07■■□□□ 1.6
Ube4aE9Q735 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Ube4aE9Q735 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
Ube4aE9Q735 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Ube4aE9Q735 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC25.07■■□□□ 1.6
Ube4aE9Q735 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
Ube4aE9Q735 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
Ube4aE9Q735 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC25.07■■□□□ 1.6
Ube4aE9Q735 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Ube4aE9Q735 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC25.06■■□□□ 1.6
Ube4aE9Q735 Wdr70-203ENSMUST00000227371 1130 ntBASIC25.06■■□□□ 1.6
Ube4aE9Q735 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Ube4aE9Q735 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC25.06■■□□□ 1.6
Ube4aE9Q735 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Ube4aE9Q735 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Ube4aE9Q735 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Ube4aE9Q735 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC25.05■■□□□ 1.6
Ube4aE9Q735 Gm8493-201ENSMUST00000196881 489 ntBASIC25.05■■□□□ 1.6
Ube4aE9Q735 Gm21168-201ENSMUST00000199646 1096 ntBASIC25.05■■□□□ 1.6
Ube4aE9Q735 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC25.05■■□□□ 1.6
Ube4aE9Q735 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
Ube4aE9Q735 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ube4aE9Q735 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Ube4aE9Q735 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Ube4aE9Q735 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ube4aE9Q735 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
Ube4aE9Q735 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
Ube4aE9Q735 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ube4aE9Q735 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ube4aE9Q735 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Ube4aE9Q735 Gm43017-201ENSMUST00000198296 752 ntBASIC25.03■■□□□ 1.6
Ube4aE9Q735 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ube4aE9Q735 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ube4aE9Q735 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ube4aE9Q735 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
Ube4aE9Q735 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC25.03■■□□□ 1.6
Ube4aE9Q735 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Ube4aE9Q735 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Ube4aE9Q735 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Ube4aE9Q735 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Ube4aE9Q735 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Ube4aE9Q735 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Ube4aE9Q735 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ube4aE9Q735 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ube4aE9Q735 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC25.01■■□□□ 1.59
Ube4aE9Q735 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ube4aE9Q735 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ube4aE9Q735 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Ube4aE9Q735 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
Ube4aE9Q735 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC25■■□□□ 1.59
Ube4aE9Q735 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Ube4aE9Q735 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Ube4aE9Q735 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Ube4aE9Q735 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
Ube4aE9Q735 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms