Protein–RNA interactions for Protein: A0A0B4J1J5

Ighv9-3, Immunoglobulin heavy variable V9-3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv9-3A0A0B4J1J5 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Gm22238-201ENSMUST00000175222 88 ntBASIC17.18■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.18■□□□□ 0.34
Ighv9-3A0A0B4J1J5 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.17■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.17■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Ighv9-3A0A0B4J1J5 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.17■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Ighv9-3A0A0B4J1J5 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.16■□□□□ 0.34
Ighv9-3A0A0B4J1J5 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.14■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.13■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv9-3A0A0B4J1J5 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.12■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.12■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.11■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv9-3A0A0B4J1J5 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.1■□□□□ 0.33
Ighv9-3A0A0B4J1J5 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Ighv9-3A0A0B4J1J5 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ighv9-3A0A0B4J1J5 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms