Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav10A0A075B642 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav10A0A075B642 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav10A0A075B642 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav10A0A075B642 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trav10A0A075B642 Gm15820-201ENSMUST00000201566 728 ntBASIC18.32■□□□□ 0.52
Trav10A0A075B642 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.32■□□□□ 0.52
Trav10A0A075B642 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.32■□□□□ 0.52
Trav10A0A075B642 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav10A0A075B642 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav10A0A075B642 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav10A0A075B642 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav10A0A075B642 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav10A0A075B642 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav10A0A075B642 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.31■□□□□ 0.52
Trav10A0A075B642 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.31■□□□□ 0.52
Trav10A0A075B642 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav10A0A075B642 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav10A0A075B642 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.31■□□□□ 0.52
Trav10A0A075B642 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav10A0A075B642 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.3■□□□□ 0.52
Trav10A0A075B642 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav10A0A075B642 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav10A0A075B642 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav10A0A075B642 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav10A0A075B642 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Trav10A0A075B642 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.3■□□□□ 0.52
Trav10A0A075B642 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.3■□□□□ 0.52
Trav10A0A075B642 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.3■□□□□ 0.52
Trav10A0A075B642 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
Trav10A0A075B642 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trav10A0A075B642 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav10A0A075B642 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav10A0A075B642 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav10A0A075B642 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trav10A0A075B642 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Trav10A0A075B642 Gm5812-201ENSMUST00000061073 957 ntBASIC18.29■□□□□ 0.52
Trav10A0A075B642 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Trav10A0A075B642 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Trav10A0A075B642 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav10A0A075B642 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav10A0A075B642 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav10A0A075B642 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Trav10A0A075B642 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav10A0A075B642 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav10A0A075B642 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trav10A0A075B642 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav10A0A075B642 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.28■□□□□ 0.52
Trav10A0A075B642 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Trav10A0A075B642 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav10A0A075B642 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav10A0A075B642 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav10A0A075B642 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav10A0A075B642 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav10A0A075B642 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav10A0A075B642 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav10A0A075B642 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav10A0A075B642 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav10A0A075B642 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Trav10A0A075B642 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav10A0A075B642 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav10A0A075B642 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav10A0A075B642 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav10A0A075B642 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav10A0A075B642 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.27■□□□□ 0.52
Trav10A0A075B642 Gm10399-202ENSMUST00000202768 748 ntBASIC18.27■□□□□ 0.52
Trav10A0A075B642 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.27■□□□□ 0.52
Trav10A0A075B642 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav10A0A075B642 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav10A0A075B642 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav10A0A075B642 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Trav10A0A075B642 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav10A0A075B642 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Trav10A0A075B642 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Trav10A0A075B642 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Trav10A0A075B642 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trav10A0A075B642 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav10A0A075B642 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trav10A0A075B642 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav10A0A075B642 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trav10A0A075B642 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trav10A0A075B642 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav10A0A075B642 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trav10A0A075B642 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Trav10A0A075B642 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Trav10A0A075B642 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav10A0A075B642 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trav10A0A075B642 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.25■□□□□ 0.51
Trav10A0A075B642 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav10A0A075B642 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav10A0A075B642 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav10A0A075B642 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav10A0A075B642 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Trav10A0A075B642 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Trav10A0A075B642 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.24■□□□□ 0.51
Trav10A0A075B642 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trav10A0A075B642 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav10A0A075B642 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav10A0A075B642 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Trav10A0A075B642 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms