Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7n-4A0A075B620 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trav7n-4A0A075B620 AC131739.1-201ENSMUST00000221692 1245 ntBASIC15.63■□□□□ 0.09
Trav7n-4A0A075B620 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7n-4A0A075B620 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7n-4A0A075B620 Gm12818-201ENSMUST00000117562 1349 ntBASIC15.63■□□□□ 0.09
Trav7n-4A0A075B620 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7n-4A0A075B620 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7n-4A0A075B620 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7n-4A0A075B620 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7n-4A0A075B620 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7n-4A0A075B620 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7n-4A0A075B620 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7n-4A0A075B620 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7n-4A0A075B620 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7n-4A0A075B620 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7n-4A0A075B620 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7n-4A0A075B620 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7n-4A0A075B620 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7n-4A0A075B620 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7n-4A0A075B620 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7n-4A0A075B620 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7n-4A0A075B620 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7n-4A0A075B620 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7n-4A0A075B620 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trav7n-4A0A075B620 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7n-4A0A075B620 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC15.61■□□□□ 0.09
Trav7n-4A0A075B620 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.61■□□□□ 0.09
Trav7n-4A0A075B620 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7n-4A0A075B620 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7n-4A0A075B620 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trav7n-4A0A075B620 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trav7n-4A0A075B620 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trav7n-4A0A075B620 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7n-4A0A075B620 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7n-4A0A075B620 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7n-4A0A075B620 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC15.61■□□□□ 0.09
Trav7n-4A0A075B620 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.61■□□□□ 0.09
Trav7n-4A0A075B620 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.6■□□□□ 0.09
Trav7n-4A0A075B620 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC15.6■□□□□ 0.09
Trav7n-4A0A075B620 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC15.6■□□□□ 0.09
Trav7n-4A0A075B620 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav7n-4A0A075B620 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav7n-4A0A075B620 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC15.6■□□□□ 0.09
Trav7n-4A0A075B620 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC15.6■□□□□ 0.09
Trav7n-4A0A075B620 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav7n-4A0A075B620 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav7n-4A0A075B620 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav7n-4A0A075B620 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav7n-4A0A075B620 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav7n-4A0A075B620 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav7n-4A0A075B620 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7n-4A0A075B620 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trav7n-4A0A075B620 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7n-4A0A075B620 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7n-4A0A075B620 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Trav7n-4A0A075B620 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7n-4A0A075B620 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7n-4A0A075B620 Mir3960-201ENSMUST00000198213 73 ntBASIC15.59■□□□□ 0.09
Trav7n-4A0A075B620 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7n-4A0A075B620 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7n-4A0A075B620 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7n-4A0A075B620 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7n-4A0A075B620 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav7n-4A0A075B620 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.09
Trav7n-4A0A075B620 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7n-4A0A075B620 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC15.58■□□□□ 0.08
Trav7n-4A0A075B620 Gm5131-201ENSMUST00000212776 1238 ntBASIC15.58■□□□□ 0.08
Trav7n-4A0A075B620 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7n-4A0A075B620 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7n-4A0A075B620 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7n-4A0A075B620 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7n-4A0A075B620 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7n-4A0A075B620 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav7n-4A0A075B620 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trav7n-4A0A075B620 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Trav7n-4A0A075B620 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7n-4A0A075B620 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7n-4A0A075B620 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7n-4A0A075B620 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trav7n-4A0A075B620 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav7n-4A0A075B620 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Trav7n-4A0A075B620 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7n-4A0A075B620 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7n-4A0A075B620 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav7n-4A0A075B620 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7n-4A0A075B620 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7n-4A0A075B620 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7n-4A0A075B620 Gm8093-201ENSMUST00000128935 1892 ntBASIC15.57■□□□□ 0.08
Trav7n-4A0A075B620 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7n-4A0A075B620 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC15.56■□□□□ 0.08
Trav7n-4A0A075B620 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7n-4A0A075B620 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7n-4A0A075B620 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7n-4A0A075B620 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trav7n-4A0A075B620 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7n-4A0A075B620 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7n-4A0A075B620 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7n-4A0A075B620 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav7n-4A0A075B620 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms