Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
H2afb1S4R1E0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.74■□□□□ 0.59
H2afb1S4R1E0 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
H2afb1S4R1E0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.74■□□□□ 0.59
H2afb1S4R1E0 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
H2afb1S4R1E0 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
H2afb1S4R1E0 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
H2afb1S4R1E0 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.73■□□□□ 0.59
H2afb1S4R1E0 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
H2afb1S4R1E0 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
H2afb1S4R1E0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
H2afb1S4R1E0 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
H2afb1S4R1E0 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
H2afb1S4R1E0 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
H2afb1S4R1E0 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
H2afb1S4R1E0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
H2afb1S4R1E0 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
H2afb1S4R1E0 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
H2afb1S4R1E0 Mir6538-201ENSMUST00000183713 110 ntBASIC18.72■□□□□ 0.59
H2afb1S4R1E0 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.72■□□□□ 0.59
H2afb1S4R1E0 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
H2afb1S4R1E0 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
H2afb1S4R1E0 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.71■□□□□ 0.59
H2afb1S4R1E0 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
H2afb1S4R1E0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
H2afb1S4R1E0 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.71■□□□□ 0.59
H2afb1S4R1E0 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
H2afb1S4R1E0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.71■□□□□ 0.59
H2afb1S4R1E0 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
H2afb1S4R1E0 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
H2afb1S4R1E0 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
H2afb1S4R1E0 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
H2afb1S4R1E0 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
H2afb1S4R1E0 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.71■□□□□ 0.58
H2afb1S4R1E0 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
H2afb1S4R1E0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
H2afb1S4R1E0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
H2afb1S4R1E0 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
H2afb1S4R1E0 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
H2afb1S4R1E0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.69■□□□□ 0.58
H2afb1S4R1E0 Gm12366-201ENSMUST00000121722 873 ntBASIC18.69■□□□□ 0.58
H2afb1S4R1E0 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.69■□□□□ 0.58
H2afb1S4R1E0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.69■□□□□ 0.58
H2afb1S4R1E0 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.69■□□□□ 0.58
H2afb1S4R1E0 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
H2afb1S4R1E0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.69■□□□□ 0.58
H2afb1S4R1E0 Gm5786-201ENSMUST00000085368 882 ntBASIC18.69■□□□□ 0.58
H2afb1S4R1E0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
H2afb1S4R1E0 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
H2afb1S4R1E0 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
H2afb1S4R1E0 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
H2afb1S4R1E0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
H2afb1S4R1E0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
H2afb1S4R1E0 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
H2afb1S4R1E0 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
H2afb1S4R1E0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
H2afb1S4R1E0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
H2afb1S4R1E0 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
H2afb1S4R1E0 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
H2afb1S4R1E0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
H2afb1S4R1E0 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.67■□□□□ 0.58
H2afb1S4R1E0 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
H2afb1S4R1E0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.67■□□□□ 0.58
H2afb1S4R1E0 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
H2afb1S4R1E0 Gm10420-201ENSMUST00000121713 882 ntBASIC18.67■□□□□ 0.58
H2afb1S4R1E0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
H2afb1S4R1E0 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.67■□□□□ 0.58
H2afb1S4R1E0 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
H2afb1S4R1E0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
H2afb1S4R1E0 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
H2afb1S4R1E0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
H2afb1S4R1E0 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
H2afb1S4R1E0 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
H2afb1S4R1E0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
H2afb1S4R1E0 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
H2afb1S4R1E0 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
H2afb1S4R1E0 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
H2afb1S4R1E0 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
H2afb1S4R1E0 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.66■□□□□ 0.58
H2afb1S4R1E0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2afb1S4R1E0 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
H2afb1S4R1E0 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
H2afb1S4R1E0 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2afb1S4R1E0 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2afb1S4R1E0 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.65■□□□□ 0.58
H2afb1S4R1E0 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.65■□□□□ 0.58
H2afb1S4R1E0 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2afb1S4R1E0 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.65■□□□□ 0.58
H2afb1S4R1E0 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2afb1S4R1E0 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H2afb1S4R1E0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
H2afb1S4R1E0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
H2afb1S4R1E0 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
H2afb1S4R1E0 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
H2afb1S4R1E0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
H2afb1S4R1E0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.64■□□□□ 0.57
H2afb1S4R1E0 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
H2afb1S4R1E0 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.64■□□□□ 0.57
H2afb1S4R1E0 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
H2afb1S4R1E0 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms