Protein–RNA interactions for Protein: Q9Z0M3

Cdh20, Cadherin-20, mousemouse

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh20Q9Z0M3 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Cdh20Q9Z0M3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Cdh20Q9Z0M3 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdh20Q9Z0M3 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdh20Q9Z0M3 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.23■□□□□ 0.67
Cdh20Q9Z0M3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
Cdh20Q9Z0M3 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdh20Q9Z0M3 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.23■□□□□ 0.67
Cdh20Q9Z0M3 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdh20Q9Z0M3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Cdh20Q9Z0M3 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdh20Q9Z0M3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdh20Q9Z0M3 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Cdh20Q9Z0M3 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdh20Q9Z0M3 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdh20Q9Z0M3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.22■□□□□ 0.67
Cdh20Q9Z0M3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.22■□□□□ 0.67
Cdh20Q9Z0M3 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdh20Q9Z0M3 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdh20Q9Z0M3 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdh20Q9Z0M3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdh20Q9Z0M3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdh20Q9Z0M3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Cdh20Q9Z0M3 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdh20Q9Z0M3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.2■□□□□ 0.66
Cdh20Q9Z0M3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdh20Q9Z0M3 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdh20Q9Z0M3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cdh20Q9Z0M3 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdh20Q9Z0M3 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.2■□□□□ 0.66
Cdh20Q9Z0M3 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
Cdh20Q9Z0M3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdh20Q9Z0M3 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdh20Q9Z0M3 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdh20Q9Z0M3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Cdh20Q9Z0M3 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cdh20Q9Z0M3 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cdh20Q9Z0M3 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdh20Q9Z0M3 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdh20Q9Z0M3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cdh20Q9Z0M3 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Cdh20Q9Z0M3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdh20Q9Z0M3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdh20Q9Z0M3 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdh20Q9Z0M3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Cdh20Q9Z0M3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Cdh20Q9Z0M3 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdh20Q9Z0M3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Cdh20Q9Z0M3 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.18■□□□□ 0.66
Cdh20Q9Z0M3 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.18■□□□□ 0.66
Cdh20Q9Z0M3 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdh20Q9Z0M3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Cdh20Q9Z0M3 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.17■□□□□ 0.66
Cdh20Q9Z0M3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdh20Q9Z0M3 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdh20Q9Z0M3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdh20Q9Z0M3 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdh20Q9Z0M3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Cdh20Q9Z0M3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdh20Q9Z0M3 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh20Q9Z0M3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh20Q9Z0M3 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh20Q9Z0M3 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh20Q9Z0M3 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh20Q9Z0M3 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh20Q9Z0M3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh20Q9Z0M3 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh20Q9Z0M3 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh20Q9Z0M3 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh20Q9Z0M3 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh20Q9Z0M3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Cdh20Q9Z0M3 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.15■□□□□ 0.66
Cdh20Q9Z0M3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh20Q9Z0M3 Gm10232-201ENSMUST00000089221 720 ntBASIC19.15■□□□□ 0.66
Cdh20Q9Z0M3 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh20Q9Z0M3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh20Q9Z0M3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh20Q9Z0M3 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh20Q9Z0M3 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cdh20Q9Z0M3 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cdh20Q9Z0M3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdh20Q9Z0M3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.14■□□□□ 0.65
Cdh20Q9Z0M3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.14■□□□□ 0.65
Cdh20Q9Z0M3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Cdh20Q9Z0M3 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdh20Q9Z0M3 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdh20Q9Z0M3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdh20Q9Z0M3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Cdh20Q9Z0M3 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdh20Q9Z0M3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.13■□□□□ 0.65
Cdh20Q9Z0M3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.13■□□□□ 0.65
Cdh20Q9Z0M3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.13■□□□□ 0.65
Cdh20Q9Z0M3 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cdh20Q9Z0M3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdh20Q9Z0M3 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdh20Q9Z0M3 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cdh20Q9Z0M3 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdh20Q9Z0M3 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdh20Q9Z0M3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.12■□□□□ 0.65
Cdh20Q9Z0M3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 117.7 ms